Gene annotation
Transcriptome id Sobic.002G268000.2,Sobic.002G268000.4,Sobic.002G268000.3
Synonym Sb02g030200
Functional annotation bile acid sodium symporter family protein, putative, expressed
UniProt A0A1B6QDN3 , A0A1B6QDM5
Pfam PF01758
Panther DB PTHR10361 PTHR10361:SF30
NCBI CDD KOG2718; Na+-bile acid cotransporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT4G22840 : Sodium Bile acid symporter family
RAP-DB (Rice) LOC_Os09g34900.1 : bile acid sodium symporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a047694
Brachypodium -
Barley HORVU5Hr1G080160.30 , HORVU5Hr1G080160.31 , HORVU5Hr1G080160.18 , HORVU5Hr1G080160.19 , HORVU5Hr1G080160.16 , HORVU5Hr1G080160.23 , HORVU5Hr1G080160.15 , HORVU5Hr1G080160.22 , HORVU5Hr1G080160.17 , HORVU5Hr1G080160.27 , HORVU5Hr1G080160.26 , HORVU5Hr1G080160.25 , HORVU5Hr1G080160.24 , HORVU5Hr1G080160.21 , HORVU5Hr1G080160.20 , HORVU5Hr1G080160.29 , HORVU5Hr1G080160.28
Wheat TraesCS5A02G308700
Populus -


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cDNA sequences
Sobic.002G268000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
2 Sobic.003G062300 NF-X1-type zinc finger protein, putative, expressed K15683: NFXL1, NF-X1-type zinc finger protein NFXL1
3 Sobic.003G050900 dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative, expressed K03845: alpha-1,3-mannosyltransferase
4 Sobic.002G372500 exportin 1, putative, expressed K14288: exportin-T
5 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
6 Sobic.003G312700 glycosyl hydrolase family 47 domain contain protein, expressed K10085: ER degradation enhancer, mannosidase alpha-like 2
7 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
8 Sobic.009G142000 plus-3 domain containing protein, putative, expressed -
9 Sobic.003G445500 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.006G267600 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
11 Sobic.008G164600 expressed protein -
12 Sobic.001G393900 FAD binding domain containing protein, expressed -
13 Sobic.007G019300 adaptin, putative, expressed K12397: AP-3 complex subunit beta
14 Sobic.002G399800 PWWP domain containing protein, expressed -
15 Sobic.001G384400 glucosyltransferase, putative, expressed K03848: alpha-1,3-glucosyltransferase
16 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
17 Sobic.010G114900 expressed protein -
18 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
19 Sobic.004G224600 expressed protein -
20 Sobic.001G051700 expressed protein -


Gene co-expression network
sample Sobic002G268000 Sobic002G268000 Sobic004G085000 Sobic004G085000 Sobic002G268000--Sobic004G085000 Sobic003G062300 Sobic003G062300 Sobic002G268000--Sobic003G062300 Sobic003G050900 Sobic003G050900 Sobic002G268000--Sobic003G050900 Sobic002G372500 Sobic002G372500 Sobic002G268000--Sobic002G372500 Sobic002G145800 Sobic002G145800 Sobic002G268000--Sobic002G145800 Sobic003G312700 Sobic003G312700 Sobic002G268000--Sobic003G312700 Sobic001G451300 Sobic001G451300 Sobic002G268000--Sobic001G451300 Sobic009G142000 Sobic009G142000 Sobic002G268000--Sobic009G142000 Sobic003G445500 Sobic003G445500 Sobic002G268000--Sobic003G445500 Sobic001G145400 Sobic001G145400 Sobic004G085000--Sobic001G145400 Sobic010G114900 Sobic010G114900 Sobic004G085000--Sobic010G114900 Sobic006G185200 Sobic006G185200 Sobic004G085000--Sobic006G185200 Sobic003G199300 Sobic003G199300 Sobic004G085000--Sobic003G199300 Sobic005G010900 Sobic005G010900 Sobic004G085000--Sobic005G010900 Sobic001G219900 Sobic001G219900 Sobic004G085000--Sobic001G219900 Sobic002G430300 Sobic002G430300 Sobic004G085000--Sobic002G430300 Sobic009G101200 Sobic009G101200 Sobic004G085000--Sobic009G101200 Sobic006G086600 Sobic006G086600 Sobic004G085000--Sobic006G086600 Sobic006G224800 Sobic006G224800 Sobic003G062300--Sobic006G224800 Sobic004G309900 Sobic004G309900 Sobic003G062300--Sobic004G309900 Sobic003G062300--Sobic002G145800 Sobic003G416700 Sobic003G416700 Sobic003G062300--Sobic003G416700 Sobic005G220000 Sobic005G220000 Sobic003G062300--Sobic005G220000 Sobic001G051700 Sobic001G051700 Sobic003G062300--Sobic001G051700 Sobic002G164200 Sobic002G164200 Sobic003G062300--Sobic002G164200 Sobic003G214600 Sobic003G214600 Sobic003G062300--Sobic003G214600 Sobic007G183300 Sobic007G183300 Sobic003G062300--Sobic007G183300 Sobic005G110499 Sobic005G110499 Sobic003G050900--Sobic005G110499 Sobic009G003700 Sobic009G003700 Sobic003G050900--Sobic009G003700 Sobic003G227100 Sobic003G227100 Sobic003G050900--Sobic003G227100 Sobic003G284000 Sobic003G284000 Sobic003G050900--Sobic003G284000 Sobic003G209200 Sobic003G209200 Sobic003G050900--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic003G050900--Sobic009G077600 Sobic008G055900 Sobic008G055900 Sobic003G050900--Sobic008G055900 Sobic006G166200 Sobic006G166200 Sobic003G050900--Sobic006G166200 Sobic003G023300 Sobic003G023300 Sobic003G050900--Sobic003G023300 Sobic001G429600 Sobic001G429600 Sobic002G372500--Sobic001G429600 Sobic001G461300 Sobic001G461300 Sobic002G372500--Sobic001G461300 Sobic003G052800 Sobic003G052800 Sobic002G372500--Sobic003G052800 Sobic001G373000 Sobic001G373000 Sobic002G372500--Sobic001G373000 Sobic006G269800 Sobic006G269800 Sobic002G372500--Sobic006G269800 Sobic002G372500--Sobic001G451300 Sobic010G174700 Sobic010G174700 Sobic002G372500--Sobic010G174700 Sobic008G147200 Sobic008G147200 Sobic002G372500--Sobic008G147200 Sobic002G372500--Sobic003G199300 Sobic002G145800--Sobic006G269800 Sobic002G145800--Sobic003G416700 Sobic002G145800--Sobic007G183300 Sobic001G087600 Sobic001G087600 Sobic002G145800--Sobic001G087600 Sobic002G145800--Sobic001G051700 Sobic002G145800--Sobic003G062300 Sobic002G145800--Sobic008G147200 Sobic001G023000 Sobic001G023000 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic003G312700--Sobic001G087600 Sobic001G014300 Sobic001G014300 Sobic003G312700--Sobic001G014300 Sobic003G405500 Sobic003G405500 Sobic003G312700--Sobic003G405500 Sobic004G141800 Sobic004G141800 Sobic003G312700--Sobic004G141800 Sobic003G312700--Sobic002G430300 Sobic004G355800 Sobic004G355800 Sobic003G312700--Sobic004G355800 Sobic003G152400 Sobic003G152400 Sobic003G312700--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic003G312700--Sobic002G063900 Sobic008G140700 Sobic008G140700 Sobic003G312700--Sobic008G140700 Sobic010G262100 Sobic010G262100 Sobic001G451300--Sobic010G262100 Sobic004G034700 Sobic004G034700 Sobic001G451300--Sobic004G034700 Sobic010G138900 Sobic010G138900 Sobic001G451300--Sobic010G138900 Sobic002G043100 Sobic002G043100 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic001G451300--Sobic010G174700 Sobic002G371600 Sobic002G371600 Sobic001G451300--Sobic002G371600 Sobic001G451300--Sobic009G142000 Sobic002G399800 Sobic002G399800 Sobic001G451300--Sobic002G399800 Sobic003G294600 Sobic003G294600 Sobic009G142000--Sobic003G294600 Sobic009G142000--Sobic001G451300 Sobic009G142000--Sobic004G085000 Sobic007G029200 Sobic007G029200 Sobic009G142000--Sobic007G029200 Sobic001G453000 Sobic001G453000 Sobic009G142000--Sobic001G453000 Sobic003G123100 Sobic003G123100 Sobic009G142000--Sobic003G123100 Sobic008G132000 Sobic008G132000 Sobic009G142000--Sobic008G132000 Sobic005G200900 Sobic005G200900 Sobic009G142000--Sobic005G200900 Sobic001G536000 Sobic001G536000 Sobic009G142000--Sobic001G536000 Sobic001G111600 Sobic001G111600 Sobic003G445500--Sobic001G111600 Sobic001G352900 Sobic001G352900 Sobic003G445500--Sobic001G352900 Sobic009G109200 Sobic009G109200 Sobic003G445500--Sobic009G109200 Sobic005G128400 Sobic005G128400 Sobic003G445500--Sobic005G128400 Sobic003G293200 Sobic003G293200 Sobic003G445500--Sobic003G293200 Sobic005G191900 Sobic005G191900 Sobic003G445500--Sobic005G191900 Sobic002G397500 Sobic002G397500 Sobic003G445500--Sobic002G397500 Sobic003G445500--Sobic003G294600 Sobic010G053600 Sobic010G053600 Sobic003G445500--Sobic010G053600
Octagon: transcription factors


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