Gene annotation
Transcriptome id Sobic.003G038100.1
Synonym OVA9, Sb03g003420
Functional annotation glutaminyl-tRNA synthetase, putative, expressed
UniProt C5XMK4
Pfam PF04557 PF03950 PF04558 PF00749
Panther DB PTHR11451 PTHR11451:SF24
NCBI CDD -
KEGG Orthology K01886; QARS, glutaminyl-tRNA synthetase
Gene Ontology GO:0006425; glutaminyl-tRNA aminoacylation GO:0005737cytoplasm GO:0005524ATP binding GO:0004819glutamine-tRNA ligase activity GO:0000166nucleotide binding GO:0006418tRNA aminoacylation for protein translation GO:0004812aminoacyl-tRNA ligase activity GO:0016876aminoacyl-tRNA ligase activity


Orthologs (automatic annotation)
TAIR AT1G25350 : glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative
RAP-DB (Rice) LOC_Os01g09000.1 : glutaminyl-tRNA synthetase, putative, expressed
MaizeGDB (Corn) Zm00025a023125 , Zm00025a035825
Brachypodium KQK03084
Barley HORVU3Hr1G020250.6 , HORVU3Hr1G020250.7 , HORVU3Hr1G020250.4 , HORVU3Hr1G020250.5 , HORVU3Hr1G020250.2 , HORVU3Hr1G020250.3 , HORVU3Hr1G020250.1 , HORVU3Hr1G020250.8 , HORVU3Hr1G020250.9 , HORVU3Hr1G020250.14 , HORVU3Hr1G020250.10 , HORVU3Hr1G020250.12 , HORVU3Hr1G020250.11 , HORVU3Hr1G020250.13
Wheat TraesCS5B02G084000 , TraesCS7A02G489700 , TraesCS7D02G476100 , TraesCS3B02G132300 , TraesCS3B02G132300 , TraesCS3A02G111500 , TraesCS7B02G392800 , TraesCS3D02G113800
Populus -


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cDNA sequences
Sobic.003G038100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G161000 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
2 Sobic.004G311400 PHD-finger domain containing protein, putative, expressed -
3 Sobic.004G088200 transcription factor S-II, central domain containing protein, expressed -
4 Sobic.003G438900 FYVE zinc finger domain containing protein, expressed -
5 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.003G194500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
8 Sobic.002G029100 GYF domain containing protein, putative, expressed -
9 Sobic.004G237100 AP2/EREBP transcription factor BABY BOOM, putative, expressed -
10 Sobic.005G079800 transcriptional corepressor SEUSS, putative, expressed -
11 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
12 Sobic.001G178600 metal ion binding protein, putative, expressed -
13 Sobic.002G159200 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
14 Sobic.008G088200 DnaK family protein, putative, expressed -
15 Sobic.005G021500 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
16 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -
17 Sobic.001G426900 coronatine-insensitive protein, putative, expressed K13463: coronatine-insensitive protein 1
18 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
19 Sobic.006G251900 - -
20 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G038100 Sobic003G038100 Sobic006G161000 Sobic006G161000 Sobic003G038100--Sobic006G161000 Sobic004G311400 Sobic004G311400 Sobic003G038100--Sobic004G311400 Sobic004G088200 Sobic004G088200 Sobic003G038100--Sobic004G088200 Sobic003G438900 Sobic003G438900 Sobic003G038100--Sobic003G438900 Sobic003G394300 Sobic003G394300 Sobic003G038100--Sobic003G394300 Sobic003G194500 Sobic003G194500 Sobic003G038100--Sobic003G194500 Sobic005G207500 Sobic005G207500 Sobic003G038100--Sobic005G207500 Sobic002G029100 Sobic002G029100 Sobic003G038100--Sobic002G029100 Sobic004G237100 Sobic004G237100 Sobic003G038100--Sobic004G237100 Sobic006G161000--Sobic003G038100 Sobic004G049700 Sobic004G049700 Sobic006G161000--Sobic004G049700 Sobic001G405300 Sobic001G405300 Sobic006G161000--Sobic001G405300 Sobic006G186400 Sobic006G186400 Sobic006G161000--Sobic006G186400 Sobic010G077500 Sobic010G077500 Sobic006G161000--Sobic010G077500 Sobic007G026000 Sobic007G026000 Sobic006G161000--Sobic007G026000 Sobic003G114500 Sobic003G114500 Sobic006G161000--Sobic003G114500 Sobic004G180900 Sobic004G180900 Sobic006G161000--Sobic004G180900 Sobic007G146900 Sobic007G146900 Sobic006G161000--Sobic007G146900 Sobic004G311400--Sobic002G029100 Sobic008G096000 Sobic008G096000 Sobic004G311400--Sobic008G096000 Sobic004G311400--Sobic003G038100 Sobic005G200800 Sobic005G200800 Sobic004G311400--Sobic005G200800 Sobic004G311400--Sobic005G207500 Sobic002G153700 Sobic002G153700 Sobic004G311400--Sobic002G153700 Sobic002G245000 Sobic002G245000 Sobic004G311400--Sobic002G245000 Sobic003G214600 Sobic003G214600 Sobic004G311400--Sobic003G214600 Sobic010G089400 Sobic010G089400 Sobic004G311400--Sobic010G089400 Sobic004G088200--Sobic003G394300 Sobic010G167900 Sobic010G167900 Sobic004G088200--Sobic010G167900 Sobic004G088200--Sobic005G207500 Sobic006G096900 Sobic006G096900 Sobic004G088200--Sobic006G096900 Sobic004G088200--Sobic002G153700 Sobic007G212300 Sobic007G212300 Sobic004G088200--Sobic007G212300 Sobic001G311500 Sobic001G311500 Sobic004G088200--Sobic001G311500 Sobic003G307000 Sobic003G307000 Sobic004G088200--Sobic003G307000 Sobic005G008800 Sobic005G008800 Sobic004G088200--Sobic005G008800 Sobic005G079800 Sobic005G079800 Sobic003G438900--Sobic005G079800 Sobic003G438900--Sobic002G153700 Sobic003G427100 Sobic003G427100 Sobic003G438900--Sobic003G427100 Sobic007G191700 Sobic007G191700 Sobic003G438900--Sobic007G191700 Sobic007G054400 Sobic007G054400 Sobic003G438900--Sobic007G054400 Sobic001G433300 Sobic001G433300 Sobic003G438900--Sobic001G433300 Sobic007G041300 Sobic007G041300 Sobic003G438900--Sobic007G041300 Sobic003G438900--Sobic004G088200 Sobic001G253200 Sobic001G253200 Sobic003G438900--Sobic001G253200 Sobic003G445400 Sobic003G445400 Sobic003G394300--Sobic003G445400 Sobic004G084300 Sobic004G084300 Sobic003G394300--Sobic004G084300 Sobic003G394300--Sobic003G307000 Sobic003G394300--Sobic004G088200 Sobic005G021500 Sobic005G021500 Sobic003G394300--Sobic005G021500 Sobic008G067600 Sobic008G067600 Sobic003G394300--Sobic008G067600 Sobic004G158200 Sobic004G158200 Sobic003G394300--Sobic004G158200 Sobic009G000500 Sobic009G000500 Sobic003G394300--Sobic009G000500 Sobic007G078600 Sobic007G078600 Sobic003G394300--Sobic007G078600 Sobic003G194500--Sobic007G212300 Sobic004G023100 Sobic004G023100 Sobic003G194500--Sobic004G023100 Sobic001G088100 Sobic001G088100 Sobic003G194500--Sobic001G088100 Sobic001G227400 Sobic001G227400 Sobic003G194500--Sobic001G227400 Sobic002G380200 Sobic002G380200 Sobic003G194500--Sobic002G380200 Sobic001G493200 Sobic001G493200 Sobic003G194500--Sobic001G493200 Sobic003G266001 Sobic003G266001 Sobic003G194500--Sobic003G266001 Sobic004G314000 Sobic004G314000 Sobic003G194500--Sobic004G314000 Sobic008G118200 Sobic008G118200 Sobic003G194500--Sobic008G118200 Sobic003G059750 Sobic003G059750 Sobic005G207500--Sobic003G059750 Sobic005G207500--Sobic002G153700 Sobic007G103600 Sobic007G103600 Sobic005G207500--Sobic007G103600 Sobic003G119000 Sobic003G119000 Sobic005G207500--Sobic003G119000 Sobic008G009700 Sobic008G009700 Sobic005G207500--Sobic008G009700 Sobic002G353600 Sobic002G353600 Sobic005G207500--Sobic002G353600 Sobic010G069100 Sobic010G069100 Sobic005G207500--Sobic010G069100 Sobic002G071500 Sobic002G071500 Sobic005G207500--Sobic002G071500 Sobic001G026200 Sobic001G026200 Sobic005G207500--Sobic001G026200 Sobic002G029100--Sobic004G311400 Sobic002G029100--Sobic003G214600 Sobic002G029100--Sobic005G200800 Sobic009G255600 Sobic009G255600 Sobic002G029100--Sobic009G255600 Sobic007G183300 Sobic007G183300 Sobic002G029100--Sobic007G183300 Sobic002G029100--Sobic002G245000 Sobic010G186600 Sobic010G186600 Sobic002G029100--Sobic010G186600 Sobic002G164200 Sobic002G164200 Sobic002G029100--Sobic002G164200 Sobic008G002300 Sobic008G002300 Sobic002G029100--Sobic008G002300 Sobic004G237100--Sobic001G088100 Sobic001G375300 Sobic001G375300 Sobic004G237100--Sobic001G375300 Sobic002G277600 Sobic002G277600 Sobic004G237100--Sobic002G277600 Sobic004G237100--Sobic005G021500 Sobic004G237100--Sobic004G088200 Sobic004G237100--Sobic005G079800 Sobic004G264300 Sobic004G264300 Sobic004G237100--Sobic004G264300 Sobic002G127100 Sobic002G127100 Sobic004G237100--Sobic002G127100 Sobic001G124000 Sobic001G124000 Sobic004G237100--Sobic001G124000
Octagon: transcription factors


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