Gene annotation
Transcriptome id Sobic.003G077300.1,Sobic.003G077300.2
Synonym Sb03g006520
Functional annotation TP53RK-binding protein, putative, expressed
UniProt A0A1B6Q1X7 , A0A1B6Q1W7
Pfam PF08617
Panther DB PTHR15840
NCBI CDD KOG4066; Cell growth regulatory protein CGR11
KEGG Orthology K15901; CGI121, EKC/KEOPS complex subunit CGI121/TPRKB
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34412 : -
RAP-DB (Rice) LOC_Os01g04910.1 : TP53RK-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a023500
Brachypodium -
Barley -
Wheat TraesCS3B02G067800 , TraesCS3D02G054700 , TraesCS3B02G067800 , TraesCS3A02G055400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G108801 - -
2 Sobic.004G343200 dehydrogenase, putative, expressed K00121: frmA, ADH5, S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase
3 Sobic.004G198900 expressed protein -
4 Sobic.003G395300 TBC domain containing protein, expressed -
5 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
6 Sobic.003G199700 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
8 Sobic.010G050400 methyltransferase-like protein 5, putative, expressed -
9 Sobic.006G242500 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
10 Sobic.002G144275 - -
11 Sobic.003G306400 holliday junction resolvase, putative, expressed K07447: putative holliday junction resolvase
12 Sobic.002G116500 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
13 Sobic.001G488100 OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed K14297: NUP98, ADAR2, nuclear pore complex protein Nup98-Nup96
14 Sobic.001G203500 pentatricopeptide, putative, expressed -
15 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
16 Sobic.001G538500 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G210000 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
18 Sobic.002G365900 WD repeat-containing protein 12, putative, expressed K14863: WDR12, ribosome biogenesis protein
19 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
20 Sobic.004G322300 nucleotide binding protein, putative, expressed K03351: anaphase-promoting complex subunit 4


Gene co-expression network
sample Sobic003G077300 Sobic003G077300 Sobic005G108801 Sobic005G108801 Sobic003G077300--Sobic005G108801 Sobic004G343200 Sobic004G343200 Sobic003G077300--Sobic004G343200 Sobic004G198900 Sobic004G198900 Sobic003G077300--Sobic004G198900 Sobic003G395300 Sobic003G395300 Sobic003G077300--Sobic003G395300 Sobic003G008600 Sobic003G008600 Sobic003G077300--Sobic003G008600 Sobic003G199700 Sobic003G199700 Sobic003G077300--Sobic003G199700 Sobic004G075200 Sobic004G075200 Sobic003G077300--Sobic004G075200 Sobic010G050400 Sobic010G050400 Sobic003G077300--Sobic010G050400 Sobic006G242500 Sobic006G242500 Sobic003G077300--Sobic006G242500 Sobic005G108801--Sobic003G077300 Sobic002G394600 Sobic002G394600 Sobic005G108801--Sobic002G394600 Sobic005G108801--Sobic004G198900 Sobic005G108801--Sobic004G343200 Sobic007G217400 Sobic007G217400 Sobic005G108801--Sobic007G217400 Sobic007G134100 Sobic007G134100 Sobic005G108801--Sobic007G134100 Sobic005G108801--Sobic003G199700 Sobic005G120700 Sobic005G120700 Sobic005G108801--Sobic005G120700 Sobic006G245700 Sobic006G245700 Sobic005G108801--Sobic006G245700 Sobic007G051400 Sobic007G051400 Sobic004G343200--Sobic007G051400 Sobic003G311500 Sobic003G311500 Sobic004G343200--Sobic003G311500 Sobic003G360300 Sobic003G360300 Sobic004G343200--Sobic003G360300 Sobic007G209600 Sobic007G209600 Sobic004G343200--Sobic007G209600 Sobic001G488100 Sobic001G488100 Sobic004G343200--Sobic001G488100 Sobic006G255900 Sobic006G255900 Sobic004G343200--Sobic006G255900 Sobic001G229300 Sobic001G229300 Sobic004G343200--Sobic001G229300 Sobic004G342300 Sobic004G342300 Sobic004G343200--Sobic004G342300 Sobic009G176700 Sobic009G176700 Sobic004G343200--Sobic009G176700 Sobic002G017900 Sobic002G017900 Sobic004G198900--Sobic002G017900 Sobic004G198900--Sobic006G242500 Sobic004G212700 Sobic004G212700 Sobic004G198900--Sobic004G212700 Sobic004G198900--Sobic005G120700 Sobic006G233000 Sobic006G233000 Sobic004G198900--Sobic006G233000 Sobic010G032400 Sobic010G032400 Sobic004G198900--Sobic010G032400 Sobic003G274400 Sobic003G274400 Sobic004G198900--Sobic003G274400 Sobic001G536000 Sobic001G536000 Sobic004G198900--Sobic001G536000 Sobic004G155600 Sobic004G155600 Sobic004G198900--Sobic004G155600 Sobic001G207500 Sobic001G207500 Sobic003G395300--Sobic001G207500 Sobic001G467100 Sobic001G467100 Sobic003G395300--Sobic001G467100 Sobic006G039400 Sobic006G039400 Sobic003G395300--Sobic006G039400 Sobic001G358500 Sobic001G358500 Sobic003G395300--Sobic001G358500 Sobic008G129600 Sobic008G129600 Sobic003G395300--Sobic008G129600 Sobic002G160700 Sobic002G160700 Sobic003G395300--Sobic002G160700 Sobic002G131400 Sobic002G131400 Sobic003G395300--Sobic002G131400 Sobic010G179700 Sobic010G179700 Sobic003G395300--Sobic010G179700 Sobic003G182300 Sobic003G182300 Sobic003G395300--Sobic003G182300 Sobic001G008500 Sobic001G008500 Sobic003G008600--Sobic001G008500 Sobic001G115500 Sobic001G115500 Sobic003G008600--Sobic001G115500 Sobic002G423500 Sobic002G423500 Sobic003G008600--Sobic002G423500 Sobic002G365900 Sobic002G365900 Sobic003G008600--Sobic002G365900 Sobic002G208400 Sobic002G208400 Sobic003G008600--Sobic002G208400 Sobic004G215700 Sobic004G215700 Sobic003G008600--Sobic004G215700 Sobic001G460500 Sobic001G460500 Sobic003G008600--Sobic001G460500 Sobic003G008600--Sobic004G075200 Sobic003G130000 Sobic003G130000 Sobic003G008600--Sobic003G130000 Sobic003G199700--Sobic006G245700 Sobic001G033000 Sobic001G033000 Sobic003G199700--Sobic001G033000 Sobic003G199700--Sobic004G212700 Sobic006G251600 Sobic006G251600 Sobic003G199700--Sobic006G251600 Sobic001G436300 Sobic001G436300 Sobic003G199700--Sobic001G436300 Sobic006G127500 Sobic006G127500 Sobic003G199700--Sobic006G127500 Sobic003G199700--Sobic002G365900 Sobic003G199700--Sobic004G343200 Sobic004G173100 Sobic004G173100 Sobic003G199700--Sobic004G173100 Sobic009G207200 Sobic009G207200 Sobic004G075200--Sobic009G207200 Sobic001G469200 Sobic001G469200 Sobic004G075200--Sobic001G469200 Sobic008G125000 Sobic008G125000 Sobic004G075200--Sobic008G125000 Sobic004G075200--Sobic001G467100 Sobic007G047600 Sobic007G047600 Sobic004G075200--Sobic007G047600 Sobic006G029400 Sobic006G029400 Sobic004G075200--Sobic006G029400 Sobic004G256300 Sobic004G256300 Sobic004G075200--Sobic004G256300 Sobic004G075200--Sobic003G008600 Sobic004G075200--Sobic006G245700 Sobic005G164500 Sobic005G164500 Sobic010G050400--Sobic005G164500 Sobic009G201200 Sobic009G201200 Sobic010G050400--Sobic009G201200 Sobic010G050400--Sobic001G460500 Sobic008G191500 Sobic008G191500 Sobic010G050400--Sobic008G191500 Sobic010G050400--Sobic004G075200 Sobic010G050400--Sobic005G108801 Sobic003G259600 Sobic003G259600 Sobic010G050400--Sobic003G259600 Sobic003G039500 Sobic003G039500 Sobic010G050400--Sobic003G039500 Sobic002G270100 Sobic002G270100 Sobic010G050400--Sobic002G270100 Sobic001G143600 Sobic001G143600 Sobic006G242500--Sobic001G143600 Sobic001G210000 Sobic001G210000 Sobic006G242500--Sobic001G210000 Sobic006G242500--Sobic004G198900 Sobic006G242500--Sobic003G274400 Sobic009G045300 Sobic009G045300 Sobic006G242500--Sobic009G045300 Sobic002G318600 Sobic002G318600 Sobic006G242500--Sobic002G318600 Sobic004G307900 Sobic004G307900 Sobic006G242500--Sobic004G307900 Sobic006G188800 Sobic006G188800 Sobic006G242500--Sobic006G188800 Sobic001G397800 Sobic001G397800 Sobic006G242500--Sobic001G397800
Octagon: transcription factors


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