Gene annotation
Transcriptome id Sobic.003G446100.1,Sobic.003G446100.3,Sobic.003G446100.4
Synonym Sb03g047540
Functional annotation PWWP domain containing protein, expressed
UniProt A0A1B6Q8I6
Pfam PF00855
Panther DB PTHR35491 PTHR35491:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02950 : Tudor/PWWP/MBT superfamily protein
RAP-DB (Rice) LOC_Os11g19810.1 : PWWP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025804 , Zm00025a039029
Brachypodium KQK11834
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G365900 PWWP domain containing protein, expressed -
2 Sobic.004G205800 cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
3 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
4 Sobic.006G065600 expressed protein -
5 Sobic.008G130100 protein kinase family protein, putative, expressed -
6 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
8 Sobic.008G192600 serine/threonine-protein kinase PRP4, putative, expressed K08827: serine/threonine-protein kinase PRP4
9 Sobic.006G182900 expressed protein -
10 Sobic.001G214300 expressed protein -
11 Sobic.009G026500 ATSIZ1/SIZ1, putative, expressed -
12 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
13 Sobic.006G105400 expressed protein -
14 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
15 Sobic.003G401600 expressed protein K12879: THO complex subunit 2
16 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
17 Sobic.009G138800 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
18 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
19 Sobic.003G388100 expressed protein -
20 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25


Gene co-expression network
sample Sobic003G446100 Sobic003G446100 Sobic001G365900 Sobic001G365900 Sobic003G446100--Sobic001G365900 Sobic004G205800 Sobic004G205800 Sobic003G446100--Sobic004G205800 Sobic007G161000 Sobic007G161000 Sobic003G446100--Sobic007G161000 Sobic006G065600 Sobic006G065600 Sobic003G446100--Sobic006G065600 Sobic008G130100 Sobic008G130100 Sobic003G446100--Sobic008G130100 Sobic010G248700 Sobic010G248700 Sobic003G446100--Sobic010G248700 Sobic004G178500 Sobic004G178500 Sobic003G446100--Sobic004G178500 Sobic008G192600 Sobic008G192600 Sobic003G446100--Sobic008G192600 Sobic006G182900 Sobic006G182900 Sobic003G446100--Sobic006G182900 Sobic010G206900 Sobic010G206900 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic001G365900--Sobic008G130100 Sobic002G411600 Sobic002G411600 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic004G034900 Sobic004G034900 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic001G214300 Sobic001G214300 Sobic004G205800--Sobic001G214300 Sobic003G029700 Sobic003G029700 Sobic004G205800--Sobic003G029700 Sobic009G026500 Sobic009G026500 Sobic004G205800--Sobic009G026500 Sobic001G191600 Sobic001G191600 Sobic004G205800--Sobic001G191600 Sobic004G205800--Sobic008G192600 Sobic005G144400 Sobic005G144400 Sobic004G205800--Sobic005G144400 Sobic004G205800--Sobic001G365900 Sobic003G148000 Sobic003G148000 Sobic004G205800--Sobic003G148000 Sobic001G318432 Sobic001G318432 Sobic004G205800--Sobic001G318432 Sobic004G039200 Sobic004G039200 Sobic007G161000--Sobic004G039200 Sobic007G117400 Sobic007G117400 Sobic007G161000--Sobic007G117400 Sobic009G024000 Sobic009G024000 Sobic007G161000--Sobic009G024000 Sobic010G139000 Sobic010G139000 Sobic007G161000--Sobic010G139000 Sobic007G161000--Sobic006G182900 Sobic002G309600 Sobic002G309600 Sobic007G161000--Sobic002G309600 Sobic004G314000 Sobic004G314000 Sobic007G161000--Sobic004G314000 Sobic002G134200 Sobic002G134200 Sobic007G161000--Sobic002G134200 Sobic008G028700 Sobic008G028700 Sobic007G161000--Sobic008G028700 Sobic004G181600 Sobic004G181600 Sobic006G065600--Sobic004G181600 Sobic007G167100 Sobic007G167100 Sobic006G065600--Sobic007G167100 Sobic006G133900 Sobic006G133900 Sobic006G065600--Sobic006G133900 Sobic002G104100 Sobic002G104100 Sobic006G065600--Sobic002G104100 Sobic006G065600--Sobic008G130100 Sobic001G454500 Sobic001G454500 Sobic006G065600--Sobic001G454500 Sobic007G193700 Sobic007G193700 Sobic006G065600--Sobic007G193700 Sobic006G065600--Sobic004G178500 Sobic006G065600--Sobic001G365900 Sobic008G130100--Sobic001G365900 Sobic008G130100--Sobic001G454500 Sobic008G130100--Sobic006G133900 Sobic010G010700 Sobic010G010700 Sobic008G130100--Sobic010G010700 Sobic003G155100 Sobic003G155100 Sobic008G130100--Sobic003G155100 Sobic008G130100--Sobic004G034900 Sobic002G346200 Sobic002G346200 Sobic008G130100--Sobic002G346200 Sobic008G130100--Sobic010G206900 Sobic007G198300 Sobic007G198300 Sobic008G130100--Sobic007G198300 Sobic010G248700--Sobic001G214300 Sobic010G248700--Sobic008G130100 Sobic002G173000 Sobic002G173000 Sobic010G248700--Sobic002G173000 Sobic010G256700 Sobic010G256700 Sobic010G248700--Sobic010G256700 Sobic004G341900 Sobic004G341900 Sobic010G248700--Sobic004G341900 Sobic010G248700--Sobic001G365900 Sobic010G248700--Sobic002G104100 Sobic010G248700--Sobic003G148000 Sobic010G248700--Sobic001G454500 Sobic001G298900 Sobic001G298900 Sobic004G178500--Sobic001G298900 Sobic002G198200 Sobic002G198200 Sobic004G178500--Sobic002G198200 Sobic004G178500--Sobic004G181600 Sobic008G044100 Sobic008G044100 Sobic004G178500--Sobic008G044100 Sobic004G178500--Sobic006G133900 Sobic004G178500--Sobic006G065600 Sobic006G270700 Sobic006G270700 Sobic004G178500--Sobic006G270700 Sobic004G178500--Sobic001G365900 Sobic003G388100 Sobic003G388100 Sobic004G178500--Sobic003G388100 Sobic007G126600 Sobic007G126600 Sobic008G192600--Sobic007G126600 Sobic001G241200 Sobic001G241200 Sobic008G192600--Sobic001G241200 Sobic008G192600--Sobic009G026500 Sobic002G404700 Sobic002G404700 Sobic008G192600--Sobic002G404700 Sobic003G119000 Sobic003G119000 Sobic008G192600--Sobic003G119000 Sobic003G372700 Sobic003G372700 Sobic008G192600--Sobic003G372700 Sobic008G192600--Sobic007G117400 Sobic009G138800 Sobic009G138800 Sobic008G192600--Sobic009G138800 Sobic008G192600--Sobic004G314000 Sobic003G429650 Sobic003G429650 Sobic006G182900--Sobic003G429650 Sobic006G048500 Sobic006G048500 Sobic006G182900--Sobic006G048500 Sobic006G182900--Sobic007G161000 Sobic006G182900--Sobic001G365900 Sobic007G116200 Sobic007G116200 Sobic006G182900--Sobic007G116200 Sobic004G096600 Sobic004G096600 Sobic006G182900--Sobic004G096600 Sobic006G182900--Sobic002G134200 Sobic006G182900--Sobic001G214300 Sobic009G209300 Sobic009G209300 Sobic006G182900--Sobic009G209300
Octagon: transcription factors


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