Gene annotation
Transcriptome id Sobic.004G061800.1
Synonym Sb04g005150
Functional annotation dimethyladenosine transferase, putative, expressed
UniProt C5XW87
Pfam PF13659
Panther DB PTHR11727
NCBI CDD KOG0820; Ribosomal RNA adenine dimethylase
KEGG Orthology K14191; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47420 : Ribosomal RNA adenine dimethylase family protein
RAP-DB (Rice) LOC_Os10g10434.1 : dimethyladenosine transferase, putative, expressed
MaizeGDB (Corn) Zm00025a019161
Brachypodium KQJ95064 , KQK00666
Barley HORVU7Hr1G083220.1 , HORVU7Hr1G083220.2 , HORVU5Hr1G041990.4 , HORVU5Hr1G041990.5 , HORVU5Hr1G041990.2 , HORVU5Hr1G041990.3 , HORVU5Hr1G041990.1
Wheat TraesCS7A02G338300 , TraesCS7D02G345500 , TraesCS7D02G345500 , TraesCS7D02G345500 , TraesCS7B02G249500 , TraesCS5B02G290400
Populus -


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cDNA sequences
Sobic.004G061800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G440700 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
2 Sobic.001G288800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3
3 Sobic.002G371100 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
4 Sobic.001G491100 structural constituent of ribosome, putative, expressed K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
5 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
6 Sobic.004G103700 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
7 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
8 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -
9 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
10 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
11 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
12 Sobic.010G150575 - -
13 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
14 Sobic.005G003800 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
15 Sobic.007G195701 - -
16 Sobic.006G182100 ORM1, putative, expressed -
17 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
18 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
19 Sobic.006G010600 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
20 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E


Gene co-expression network
sample Sobic004G061800 Sobic004G061800 Sobic001G440700 Sobic001G440700 Sobic004G061800--Sobic001G440700 Sobic001G288800 Sobic001G288800 Sobic004G061800--Sobic001G288800 Sobic002G371100 Sobic002G371100 Sobic004G061800--Sobic002G371100 Sobic001G491100 Sobic001G491100 Sobic004G061800--Sobic001G491100 Sobic002G078400 Sobic002G078400 Sobic004G061800--Sobic002G078400 Sobic004G103700 Sobic004G103700 Sobic004G061800--Sobic004G103700 Sobic004G020000 Sobic004G020000 Sobic004G061800--Sobic004G020000 Sobic007G091000 Sobic007G091000 Sobic004G061800--Sobic007G091000 Sobic009G232000 Sobic009G232000 Sobic004G061800--Sobic009G232000 Sobic010G101500 Sobic010G101500 Sobic001G440700--Sobic010G101500 Sobic001G415000 Sobic001G415000 Sobic001G440700--Sobic001G415000 Sobic001G440700--Sobic004G020000 Sobic001G040800 Sobic001G040800 Sobic001G440700--Sobic001G040800 Sobic004G321900 Sobic004G321900 Sobic001G440700--Sobic004G321900 Sobic001G440700--Sobic004G061800 Sobic003G248600 Sobic003G248600 Sobic001G440700--Sobic003G248600 Sobic009G104000 Sobic009G104000 Sobic001G440700--Sobic009G104000 Sobic001G283500 Sobic001G283500 Sobic001G440700--Sobic001G283500 Sobic003G181500 Sobic003G181500 Sobic001G288800--Sobic003G181500 Sobic010G150575 Sobic010G150575 Sobic001G288800--Sobic010G150575 Sobic001G281400 Sobic001G281400 Sobic001G288800--Sobic001G281400 Sobic003G350300 Sobic003G350300 Sobic001G288800--Sobic003G350300 Sobic001G177800 Sobic001G177800 Sobic001G288800--Sobic001G177800 Sobic010G243200 Sobic010G243200 Sobic001G288800--Sobic010G243200 Sobic003G321700 Sobic003G321700 Sobic001G288800--Sobic003G321700 Sobic004G187900 Sobic004G187900 Sobic001G288800--Sobic004G187900 Sobic006G173900 Sobic006G173900 Sobic001G288800--Sobic006G173900 Sobic001G018800 Sobic001G018800 Sobic002G371100--Sobic001G018800 Sobic008G073300 Sobic008G073300 Sobic002G371100--Sobic008G073300 Sobic001G025600 Sobic001G025600 Sobic002G371100--Sobic001G025600 Sobic002G255100 Sobic002G255100 Sobic002G371100--Sobic002G255100 Sobic002G049300 Sobic002G049300 Sobic002G371100--Sobic002G049300 Sobic002G371100--Sobic004G103700 Sobic003G308000 Sobic003G308000 Sobic002G371100--Sobic003G308000 Sobic004G002350 Sobic004G002350 Sobic002G371100--Sobic004G002350 Sobic009G227400 Sobic009G227400 Sobic002G371100--Sobic009G227400 Sobic009G174900 Sobic009G174900 Sobic001G491100--Sobic009G174900 Sobic007G019100 Sobic007G019100 Sobic001G491100--Sobic007G019100 Sobic001G481700 Sobic001G481700 Sobic001G491100--Sobic001G481700 Sobic001G491100--Sobic001G025600 Sobic003G196800 Sobic003G196800 Sobic001G491100--Sobic003G196800 Sobic001G491100--Sobic002G078400 Sobic009G004400 Sobic009G004400 Sobic001G491100--Sobic009G004400 Sobic001G502200 Sobic001G502200 Sobic001G491100--Sobic001G502200 Sobic008G137600 Sobic008G137600 Sobic001G491100--Sobic008G137600 Sobic004G300900 Sobic004G300900 Sobic002G078400--Sobic004G300900 Sobic010G065400 Sobic010G065400 Sobic002G078400--Sobic010G065400 Sobic003G362400 Sobic003G362400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic008G132800 Sobic008G132800 Sobic002G078400--Sobic008G132800 Sobic001G445800 Sobic001G445800 Sobic002G078400--Sobic001G445800 Sobic001G331900 Sobic001G331900 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic010G029400 Sobic010G029400 Sobic002G078400--Sobic010G029400 Sobic004G103700--Sobic001G025600 Sobic001G172000 Sobic001G172000 Sobic004G103700--Sobic001G172000 Sobic006G010600 Sobic006G010600 Sobic004G103700--Sobic006G010600 Sobic002G135200 Sobic002G135200 Sobic004G103700--Sobic002G135200 Sobic004G103700--Sobic001G018800 Sobic003G129800 Sobic003G129800 Sobic004G103700--Sobic003G129800 Sobic007G134000 Sobic007G134000 Sobic004G103700--Sobic007G134000 Sobic002G222900 Sobic002G222900 Sobic004G103700--Sobic002G222900 Sobic004G103700--Sobic010G150575 Sobic005G034400 Sobic005G034400 Sobic004G020000--Sobic005G034400 Sobic003G220600 Sobic003G220600 Sobic004G020000--Sobic003G220600 Sobic002G045300 Sobic002G045300 Sobic004G020000--Sobic002G045300 Sobic002G083266 Sobic002G083266 Sobic004G020000--Sobic002G083266 Sobic004G020000--Sobic001G440700 Sobic010G042100 Sobic010G042100 Sobic004G020000--Sobic010G042100 Sobic006G264300 Sobic006G264300 Sobic004G020000--Sobic006G264300 Sobic004G020000--Sobic001G415000 Sobic002G153500 Sobic002G153500 Sobic004G020000--Sobic002G153500 Sobic007G091000--Sobic002G078400 Sobic007G091000--Sobic003G362400 Sobic001G128400 Sobic001G128400 Sobic007G091000--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic007G091000--Sobic005G111100 Sobic007G152400 Sobic007G152400 Sobic007G091000--Sobic007G152400 Sobic003G305100 Sobic003G305100 Sobic007G091000--Sobic003G305100 Sobic003G368500 Sobic003G368500 Sobic007G091000--Sobic003G368500 Sobic007G091000--Sobic001G025600 Sobic003G277000 Sobic003G277000 Sobic007G091000--Sobic003G277000 Sobic009G232000--Sobic001G018800 Sobic001G011200 Sobic001G011200 Sobic009G232000--Sobic001G011200 Sobic001G513500 Sobic001G513500 Sobic009G232000--Sobic001G513500 Sobic001G436200 Sobic001G436200 Sobic009G232000--Sobic001G436200 Sobic002G056200 Sobic002G056200 Sobic009G232000--Sobic002G056200 Sobic001G377800 Sobic001G377800 Sobic009G232000--Sobic001G377800 Sobic010G100000 Sobic010G100000 Sobic009G232000--Sobic010G100000 Sobic009G232000--Sobic003G321700 Sobic006G213000 Sobic006G213000 Sobic009G232000--Sobic006G213000
Octagon: transcription factors


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