Gene annotation
Transcriptome id Sobic.004G127300.1
Synonym
Functional annotation -
UniProt A0A194YQE3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G252400 S4 domain containing protein, putative, expressed K14560: U3 small nucleolar ribonucleoprotein protein IMP3
2 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
3 Sobic.004G016100 expressed protein -
4 Sobic.007G082200 white-brown complex homolog protein 11, putative, expressed -
5 Sobic.006G239700 plant protein of unknown function domain containing protein, expressed -
6 Sobic.010G260900 - -
7 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
8 Sobic.003G353700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
9 Sobic.008G006000 expressed protein -
10 Sobic.003G091600 expressed protein -
11 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.009G012000 expressed protein -
13 Sobic.007G077532 - K08597: SENP8, NEDP1, sentrin-specific protease 8
14 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G245400 - -
16 Sobic.008G155400 ankyrin, putative, expressed -
17 Sobic.004G141400 START domain containing protein, putative, expressed -
18 Sobic.008G036600 expressed protein -
19 Sobic.007G177500 thaumatin, putative, expressed -
20 Sobic.005G049000 transcription elongation factor protein, putative, expressed -


Gene co-expression network
sample Sobic004G127300 Sobic004G127300 Sobic006G252400 Sobic006G252400 Sobic004G127300--Sobic006G252400 Sobic007G192400 Sobic007G192400 Sobic004G127300--Sobic007G192400 Sobic004G016100 Sobic004G016100 Sobic004G127300--Sobic004G016100 Sobic007G082200 Sobic007G082200 Sobic004G127300--Sobic007G082200 Sobic006G239700 Sobic006G239700 Sobic004G127300--Sobic006G239700 Sobic010G260900 Sobic010G260900 Sobic004G127300--Sobic010G260900 Sobic004G259300 Sobic004G259300 Sobic004G127300--Sobic004G259300 Sobic003G353700 Sobic003G353700 Sobic004G127300--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic004G127300--Sobic008G006000 Sobic003G005100 Sobic003G005100 Sobic006G252400--Sobic003G005100 Sobic006G252400--Sobic004G127300 Sobic006G252400--Sobic007G192400 Sobic002G113200 Sobic002G113200 Sobic006G252400--Sobic002G113200 Sobic006G252400--Sobic004G259300 Sobic003G213000 Sobic003G213000 Sobic006G252400--Sobic003G213000 Sobic007G184800 Sobic007G184800 Sobic006G252400--Sobic007G184800 Sobic008G036600 Sobic008G036600 Sobic006G252400--Sobic008G036600 Sobic006G252400--Sobic010G260900 Sobic007G192400--Sobic003G353700 Sobic007G192400--Sobic008G006000 Sobic007G077532 Sobic007G077532 Sobic007G192400--Sobic007G077532 Sobic010G181600 Sobic010G181600 Sobic007G192400--Sobic010G181600 Sobic009G252300 Sobic009G252300 Sobic007G192400--Sobic009G252300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic007G192400--Sobic008G036600 Sobic004G141400 Sobic004G141400 Sobic007G192400--Sobic004G141400 Sobic004G016100--Sobic007G077532 Sobic004G016100--Sobic004G259300 Sobic007G177500 Sobic007G177500 Sobic004G016100--Sobic007G177500 Sobic004G016100--Sobic004G141400 Sobic005G170000 Sobic005G170000 Sobic004G016100--Sobic005G170000 Sobic004G016100--Sobic007G192400 Sobic003G402900 Sobic003G402900 Sobic004G016100--Sobic003G402900 Sobic009G228400 Sobic009G228400 Sobic004G016100--Sobic009G228400 Sobic004G218300 Sobic004G218300 Sobic004G016100--Sobic004G218300 Sobic007G082200--Sobic006G239700 Sobic010G146000 Sobic010G146000 Sobic007G082200--Sobic010G146000 Sobic008G100300 Sobic008G100300 Sobic007G082200--Sobic008G100300 Sobic001G065200 Sobic001G065200 Sobic007G082200--Sobic001G065200 Sobic001G444900 Sobic001G444900 Sobic007G082200--Sobic001G444900 Sobic003G091600 Sobic003G091600 Sobic007G082200--Sobic003G091600 Sobic004G011900 Sobic004G011900 Sobic007G082200--Sobic004G011900 Sobic007G082200--Sobic008G036600 Sobic004G189000 Sobic004G189000 Sobic007G082200--Sobic004G189000 Sobic006G239700--Sobic007G082200 Sobic006G239700--Sobic008G036600 Sobic008G155400 Sobic008G155400 Sobic006G239700--Sobic008G155400 Sobic005G171700 Sobic005G171700 Sobic006G239700--Sobic005G171700 Sobic004G140400 Sobic004G140400 Sobic006G239700--Sobic004G140400 Sobic006G239700--Sobic001G444900 Sobic004G178700 Sobic004G178700 Sobic006G239700--Sobic004G178700 Sobic006G239700--Sobic010G146000 Sobic006G239700--Sobic004G011900 Sobic010G260900--Sobic003G353700 Sobic008G100600 Sobic008G100600 Sobic010G260900--Sobic008G100600 Sobic001G504500 Sobic001G504500 Sobic010G260900--Sobic001G504500 Sobic010G202200 Sobic010G202200 Sobic010G260900--Sobic010G202200 Sobic010G260900--Sobic010G146000 Sobic010G260900--Sobic003G213000 Sobic010G260900--Sobic008G036600 Sobic001G024400 Sobic001G024400 Sobic010G260900--Sobic001G024400 Sobic010G260900--Sobic007G192400 Sobic004G259300--Sobic004G218300 Sobic004G259300--Sobic004G141400 Sobic004G259300--Sobic007G192400 Sobic003G250400 Sobic003G250400 Sobic004G259300--Sobic003G250400 Sobic004G259300--Sobic007G184800 Sobic004G259300--Sobic003G005100 Sobic004G259300--Sobic007G077532 Sobic004G259300--Sobic007G177500 Sobic004G259300--Sobic008G006000 Sobic003G353700--Sobic007G192400 Sobic003G353700--Sobic008G036600 Sobic005G063200 Sobic005G063200 Sobic003G353700--Sobic005G063200 Sobic003G353700--Sobic001G024400 Sobic007G039200 Sobic007G039200 Sobic003G353700--Sobic007G039200 Sobic003G353700--Sobic010G181600 Sobic003G236000 Sobic003G236000 Sobic003G353700--Sobic003G236000 Sobic004G074600 Sobic004G074600 Sobic003G353700--Sobic004G074600 Sobic003G353700--Sobic008G006000 Sobic008G006000--Sobic010G181600 Sobic008G006000--Sobic007G192400 Sobic008G006000--Sobic003G353700 Sobic008G006000--Sobic004G141400 Sobic008G006000--Sobic007G077532 Sobic010G255900 Sobic010G255900 Sobic008G006000--Sobic010G255900 Sobic005G185500 Sobic005G185500 Sobic008G006000--Sobic005G185500 Sobic003G117800 Sobic003G117800 Sobic008G006000--Sobic003G117800 Sobic001G280500 Sobic001G280500 Sobic008G006000--Sobic001G280500
Octagon: transcription factors


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