Gene annotation
Transcriptome id Sobic.004G156666.1
Synonym -
Functional annotation -
UniProt A0A1Z5RN61
Pfam -
Panther DB PTHR35552 PTHR35552:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03070 : mediator subunit 8
RAP-DB (Rice) LOC_Os03g31010.1 : expressed protein
MaizeGDB (Corn) Zm00025a047894
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
2 Sobic.010G136600 - -
3 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
4 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
5 Sobic.006G032500 - -
6 Sobic.007G161300 VHS and GAT domain containing protein, expressed -
7 Sobic.005G013200 BAH domain containing protein, expressed -
8 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
9 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
10 Sobic.001G094600 pentatricopeptide, putative, expressed -
11 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
12 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
13 Sobic.004G158200 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.009G086900 expressed protein -
15 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
16 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
17 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
18 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
19 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
20 Sobic.008G028700 SET domain containing protein, expressed -


Gene co-expression network
sample Sobic004G156666 Sobic004G156666 Sobic001G311500 Sobic001G311500 Sobic004G156666--Sobic001G311500 Sobic010G136600 Sobic010G136600 Sobic004G156666--Sobic010G136600 Sobic008G173100 Sobic008G173100 Sobic004G156666--Sobic008G173100 Sobic002G317200 Sobic002G317200 Sobic004G156666--Sobic002G317200 Sobic006G032500 Sobic006G032500 Sobic004G156666--Sobic006G032500 Sobic007G161300 Sobic007G161300 Sobic004G156666--Sobic007G161300 Sobic005G013200 Sobic005G013200 Sobic004G156666--Sobic005G013200 Sobic009G119000 Sobic009G119000 Sobic004G156666--Sobic009G119000 Sobic010G139000 Sobic010G139000 Sobic004G156666--Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic009G247400 Sobic009G247400 Sobic001G311500--Sobic009G247400 Sobic005G112300 Sobic005G112300 Sobic001G311500--Sobic005G112300 Sobic003G059750 Sobic003G059750 Sobic001G311500--Sobic003G059750 Sobic008G009700 Sobic008G009700 Sobic001G311500--Sobic008G009700 Sobic004G314000 Sobic004G314000 Sobic001G311500--Sobic004G314000 Sobic010G279450 Sobic010G279450 Sobic001G311500--Sobic010G279450 Sobic008G028700 Sobic008G028700 Sobic001G311500--Sobic008G028700 Sobic001G363500 Sobic001G363500 Sobic001G311500--Sobic001G363500 Sobic007G096600 Sobic007G096600 Sobic010G136600--Sobic007G096600 Sobic004G145500 Sobic004G145500 Sobic010G136600--Sobic004G145500 Sobic002G144933 Sobic002G144933 Sobic010G136600--Sobic002G144933 Sobic008G173900 Sobic008G173900 Sobic010G136600--Sobic008G173900 Sobic010G136600--Sobic008G028700 Sobic009G126400 Sobic009G126400 Sobic010G136600--Sobic009G126400 Sobic010G277500 Sobic010G277500 Sobic010G136600--Sobic010G277500 Sobic009G210500 Sobic009G210500 Sobic010G136600--Sobic009G210500 Sobic004G009600 Sobic004G009600 Sobic010G136600--Sobic004G009600 Sobic002G260400 Sobic002G260400 Sobic008G173100--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic008G173100--Sobic007G090430 Sobic006G116100 Sobic006G116100 Sobic008G173100--Sobic006G116100 Sobic002G063900 Sobic002G063900 Sobic008G173100--Sobic002G063900 Sobic002G264200 Sobic002G264200 Sobic008G173100--Sobic002G264200 Sobic010G236400 Sobic010G236400 Sobic008G173100--Sobic010G236400 Sobic008G153000 Sobic008G153000 Sobic008G173100--Sobic008G153000 Sobic008G173100--Sobic001G311500 Sobic010G245000 Sobic010G245000 Sobic008G173100--Sobic010G245000 Sobic004G048800 Sobic004G048800 Sobic002G317200--Sobic004G048800 Sobic001G219600 Sobic001G219600 Sobic002G317200--Sobic001G219600 Sobic002G317200--Sobic004G314000 Sobic001G433800 Sobic001G433800 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic004G242400 Sobic004G242400 Sobic002G317200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic002G317200--Sobic002G397500 Sobic002G317200--Sobic005G112300 Sobic009G260500 Sobic009G260500 Sobic002G317200--Sobic009G260500 Sobic002G180666 Sobic002G180666 Sobic006G032500--Sobic002G180666 Sobic003G372700 Sobic003G372700 Sobic006G032500--Sobic003G372700 Sobic003G148000 Sobic003G148000 Sobic006G032500--Sobic003G148000 Sobic006G032500--Sobic003G059750 Sobic002G145101 Sobic002G145101 Sobic006G032500--Sobic002G145101 Sobic006G032500--Sobic007G161300 Sobic006G032500--Sobic005G112300 Sobic006G032500--Sobic010G139000 Sobic008G084700 Sobic008G084700 Sobic006G032500--Sobic008G084700 Sobic007G161300--Sobic002G180666 Sobic007G161300--Sobic006G032500 Sobic004G007100 Sobic004G007100 Sobic007G161300--Sobic004G007100 Sobic006G048500 Sobic006G048500 Sobic007G161300--Sobic006G048500 Sobic007G161300--Sobic008G028700 Sobic007G161300--Sobic003G372700 Sobic004G039700 Sobic004G039700 Sobic007G161300--Sobic004G039700 Sobic007G161300--Sobic003G148000 Sobic001G456900 Sobic001G456900 Sobic007G161300--Sobic001G456900 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic001G222500 Sobic001G222500 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic004G084300 Sobic004G084300 Sobic005G013200--Sobic004G084300 Sobic002G153700 Sobic002G153700 Sobic009G119000--Sobic002G153700 Sobic009G119000--Sobic003G059750 Sobic002G071500 Sobic002G071500 Sobic009G119000--Sobic002G071500 Sobic010G065300 Sobic010G065300 Sobic009G119000--Sobic010G065300 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic003G416700 Sobic003G416700 Sobic009G119000--Sobic003G416700 Sobic009G119000--Sobic004G048800 Sobic009G119000--Sobic001G311500 Sobic010G139000--Sobic004G314000 Sobic010G139000--Sobic005G112300 Sobic010G139000--Sobic010G279450 Sobic010G206900 Sobic010G206900 Sobic010G139000--Sobic010G206900 Sobic010G139000--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic010G139000--Sobic001G036050 Sobic010G112100 Sobic010G112100 Sobic010G139000--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic010G139000--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic010G139000--Sobic005G008800
Octagon: transcription factors


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