Gene annotation
Transcriptome id Sobic.004G341700.2,Sobic.004G341700.1
Synonym LUH, Sb04g036910
Functional annotation transcriptional corepressor LEUNIG, putative, expressed
UniProt C5XVA2
Pfam PF08513 PF00400
Panther DB PTHR22847 PTHR22847:SF473
NCBI CDD KOG0266; WD40 repeat-containing protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G32700 : LEUNIG_homolog
RAP-DB (Rice) LOC_Os02g56880.1 : transcriptional corepressor LEUNIG, putative, expressed
MaizeGDB (Corn) Zm00025a022567
Brachypodium KQK01307
Barley HORVU6Hr1G089700.18 , HORVU6Hr1G089700.12 , HORVU6Hr1G089700.13 , HORVU6Hr1G089700.10 , HORVU6Hr1G089700.11 , HORVU6Hr1G089700.16 , HORVU6Hr1G089700.17 , HORVU6Hr1G089700.15 , HORVU6Hr1G089700.2 , HORVU6Hr1G089700.3 , HORVU6Hr1G089700.4 , HORVU6Hr1G089700.5 , HORVU6Hr1G089700.6 , HORVU6Hr1G089700.7 , HORVU6Hr1G089700.9 , HORVU6Hr1G089700.8
Wheat TraesCS6D02G368200 , TraesCS6D02G368200 , TraesCS6B02G422600 , TraesCS6B02G422600 , TraesCS6A02G383400 , TraesCS6A02G383400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
2 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
3 Sobic.002G079100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
4 Sobic.007G031600 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
5 Sobic.001G367100 pleckstrin homology domain-containing protein, putative, expressed -
6 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
7 Sobic.008G080500 expressed protein -
8 Sobic.001G315400 expressed protein -
9 Sobic.002G002100 expressed protein -
10 Sobic.001G437400 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
11 Sobic.001G384000 expressed protein -
12 Sobic.003G314700 expressed protein -
13 Sobic.001G143600 pattern formation protein EMB30, putative, expressed K18443: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
14 Sobic.002G051800 BTBT2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with tetratricopeptide repeats, expressed -
15 Sobic.010G262100 expressed protein -
16 Sobic.006G210000 zinc finger domain, LSD1 subclass family protein, expressed -
17 Sobic.008G088842 - -
18 Sobic.001G078100 expressed protein -
19 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
20 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic004G341700 Sobic004G341700 Sobic001G385400 Sobic001G385400 Sobic004G341700--Sobic001G385400 Sobic002G143200 Sobic002G143200 Sobic004G341700--Sobic002G143200 Sobic002G079100 Sobic002G079100 Sobic004G341700--Sobic002G079100 Sobic007G031600 Sobic007G031600 Sobic004G341700--Sobic007G031600 Sobic001G367100 Sobic001G367100 Sobic004G341700--Sobic001G367100 Sobic006G208400 Sobic006G208400 Sobic004G341700--Sobic006G208400 Sobic008G080500 Sobic008G080500 Sobic004G341700--Sobic008G080500 Sobic001G315400 Sobic001G315400 Sobic004G341700--Sobic001G315400 Sobic002G002100 Sobic002G002100 Sobic004G341700--Sobic002G002100 Sobic001G143600 Sobic001G143600 Sobic001G385400--Sobic001G143600 Sobic001G385400--Sobic002G143200 Sobic003G435500 Sobic003G435500 Sobic001G385400--Sobic003G435500 Sobic008G015200 Sobic008G015200 Sobic001G385400--Sobic008G015200 Sobic010G250800 Sobic010G250800 Sobic001G385400--Sobic010G250800 Sobic001G507200 Sobic001G507200 Sobic001G385400--Sobic001G507200 Sobic001G385400--Sobic002G002100 Sobic009G167100 Sobic009G167100 Sobic001G385400--Sobic009G167100 Sobic006G140600 Sobic006G140600 Sobic001G385400--Sobic006G140600 Sobic002G143200--Sobic001G385400 Sobic002G143200--Sobic006G140600 Sobic008G088842 Sobic008G088842 Sobic002G143200--Sobic008G088842 Sobic002G098500 Sobic002G098500 Sobic002G143200--Sobic002G098500 Sobic002G143200--Sobic008G015200 Sobic002G143200--Sobic003G435500 Sobic002G143200--Sobic001G367100 Sobic002G143200--Sobic004G341700 Sobic008G192700 Sobic008G192700 Sobic002G143200--Sobic008G192700 Sobic003G124600 Sobic003G124600 Sobic002G079100--Sobic003G124600 Sobic001G448100 Sobic001G448100 Sobic002G079100--Sobic001G448100 Sobic008G017100 Sobic008G017100 Sobic002G079100--Sobic008G017100 Sobic002G079100--Sobic008G080500 Sobic002G380100 Sobic002G380100 Sobic002G079100--Sobic002G380100 Sobic002G292800 Sobic002G292800 Sobic002G079100--Sobic002G292800 Sobic010G278600 Sobic010G278600 Sobic002G079100--Sobic010G278600 Sobic006G245900 Sobic006G245900 Sobic002G079100--Sobic006G245900 Sobic001G482200 Sobic001G482200 Sobic002G079100--Sobic001G482200 Sobic003G293200 Sobic003G293200 Sobic007G031600--Sobic003G293200 Sobic009G166100 Sobic009G166100 Sobic007G031600--Sobic009G166100 Sobic006G210000 Sobic006G210000 Sobic007G031600--Sobic006G210000 Sobic008G100100 Sobic008G100100 Sobic007G031600--Sobic008G100100 Sobic004G156500 Sobic004G156500 Sobic007G031600--Sobic004G156500 Sobic001G170100 Sobic001G170100 Sobic007G031600--Sobic001G170100 Sobic008G131000 Sobic008G131000 Sobic007G031600--Sobic008G131000 Sobic001G352900 Sobic001G352900 Sobic007G031600--Sobic001G352900 Sobic004G009600 Sobic004G009600 Sobic007G031600--Sobic004G009600 Sobic010G279900 Sobic010G279900 Sobic001G367100--Sobic010G279900 Sobic001G367100--Sobic001G315400 Sobic001G245900 Sobic001G245900 Sobic001G367100--Sobic001G245900 Sobic003G023400 Sobic003G023400 Sobic001G367100--Sobic003G023400 Sobic001G367100--Sobic008G080500 Sobic009G151200 Sobic009G151200 Sobic001G367100--Sobic009G151200 Sobic004G128200 Sobic004G128200 Sobic001G367100--Sobic004G128200 Sobic001G367100--Sobic002G079100 Sobic003G077500 Sobic003G077500 Sobic001G367100--Sobic003G077500 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic001G460500 Sobic001G460500 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic002G427300 Sobic002G427300 Sobic006G208400--Sobic002G427300 Sobic003G314700 Sobic003G314700 Sobic006G208400--Sobic003G314700 Sobic007G159200 Sobic007G159200 Sobic008G080500--Sobic007G159200 Sobic010G262100 Sobic010G262100 Sobic008G080500--Sobic010G262100 Sobic004G355800 Sobic004G355800 Sobic008G080500--Sobic004G355800 Sobic006G112700 Sobic006G112700 Sobic008G080500--Sobic006G112700 Sobic008G080500--Sobic002G079100 Sobic005G200900 Sobic005G200900 Sobic008G080500--Sobic005G200900 Sobic010G269300 Sobic010G269300 Sobic008G080500--Sobic010G269300 Sobic003G299500 Sobic003G299500 Sobic008G080500--Sobic003G299500 Sobic002G235900 Sobic002G235900 Sobic008G080500--Sobic002G235900 Sobic001G315400--Sobic001G367100 Sobic001G315400--Sobic003G077500 Sobic001G315400--Sobic002G079100 Sobic001G315400--Sobic002G002100 Sobic005G047300 Sobic005G047300 Sobic001G315400--Sobic005G047300 Sobic002G223300 Sobic002G223300 Sobic001G315400--Sobic002G223300 Sobic001G315400--Sobic004G128200 Sobic004G227500 Sobic004G227500 Sobic001G315400--Sobic004G227500 Sobic001G395200 Sobic001G395200 Sobic001G315400--Sobic001G395200 Sobic001G113800 Sobic001G113800 Sobic002G002100--Sobic001G113800 Sobic002G002100--Sobic001G385400 Sobic005G204100 Sobic005G204100 Sobic002G002100--Sobic005G204100 Sobic002G002100--Sobic001G315400 Sobic007G210900 Sobic007G210900 Sobic002G002100--Sobic007G210900 Sobic002G002100--Sobic002G098500 Sobic002G216600 Sobic002G216600 Sobic002G002100--Sobic002G216600 Sobic006G167300 Sobic006G167300 Sobic002G002100--Sobic006G167300 Sobic002G002100--Sobic001G367100
Octagon: transcription factors


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