Gene annotation
Transcriptome id Sobic.004G344700.1
Synonym Sb04g037190
Functional annotation expressed protein
UniProt C5XVW2
Pfam -
Panther DB PTHR33344
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04555 : -
RAP-DB (Rice) LOC_Os02g57170.1 : expressed protein
MaizeGDB (Corn) Zm00025a032808 , Zm00025a031272
Brachypodium KQK01347
Barley HORVU6Hr1G090700.10 , HORVU6Hr1G090700.11 , HORVU6Hr1G090700.6 , HORVU6Hr1G090700.7 , HORVU6Hr1G090700.8 , HORVU6Hr1G090700.9
Wheat TraesCS6A02G389200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
2 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.001G389200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
4 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
5 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.004G354301 - K12236: transcriptional repressor NF-X1
7 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
8 Sobic.003G058500 expressed protein -
9 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
10 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
11 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
12 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
13 Sobic.002G200000 zinc finger, C3HC4 type, putative, expressed -
14 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
15 Sobic.004G350700 kelch repeat protein, putative, expressed -
16 Sobic.004G186900 RNA recognition motif containing protein, putative, expressed -
17 Sobic.008G111800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
18 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -
19 Sobic.003G113300 expressed protein -
20 Sobic.002G395500 ATP12 ATPase, putative, expressed K07556: ATPeAF2, ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2


Gene co-expression network
sample Sobic004G344700 Sobic004G344700 Sobic002G276800 Sobic002G276800 Sobic004G344700--Sobic002G276800 Sobic003G202600 Sobic003G202600 Sobic004G344700--Sobic003G202600 Sobic001G389200 Sobic001G389200 Sobic004G344700--Sobic001G389200 Sobic001G465400 Sobic001G465400 Sobic004G344700--Sobic001G465400 Sobic001G378200 Sobic001G378200 Sobic004G344700--Sobic001G378200 Sobic004G354301 Sobic004G354301 Sobic004G344700--Sobic004G354301 Sobic007G148400 Sobic007G148400 Sobic004G344700--Sobic007G148400 Sobic003G058500 Sobic003G058500 Sobic004G344700--Sobic003G058500 Sobic006G041800 Sobic006G041800 Sobic004G344700--Sobic006G041800 Sobic001G485300 Sobic001G485300 Sobic002G276800--Sobic001G485300 Sobic001G008100 Sobic001G008100 Sobic002G276800--Sobic001G008100 Sobic002G276800--Sobic007G148400 Sobic002G276800--Sobic006G041800 Sobic003G190600 Sobic003G190600 Sobic002G276800--Sobic003G190600 Sobic002G276800--Sobic003G058500 Sobic001G061200 Sobic001G061200 Sobic002G276800--Sobic001G061200 Sobic001G193100 Sobic001G193100 Sobic002G276800--Sobic001G193100 Sobic002G401700 Sobic002G401700 Sobic002G276800--Sobic002G401700 Sobic001G095000 Sobic001G095000 Sobic003G202600--Sobic001G095000 Sobic002G079000 Sobic002G079000 Sobic003G202600--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G202600--Sobic002G355800 Sobic007G087000 Sobic007G087000 Sobic003G202600--Sobic007G087000 Sobic001G237600 Sobic001G237600 Sobic003G202600--Sobic001G237600 Sobic010G169900 Sobic010G169900 Sobic003G202600--Sobic010G169900 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G302200 Sobic003G302200 Sobic003G202600--Sobic003G302200 Sobic001G389200--Sobic006G060000 Sobic008G168200 Sobic008G168200 Sobic001G389200--Sobic008G168200 Sobic002G395500 Sobic002G395500 Sobic001G389200--Sobic002G395500 Sobic001G389200--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic001G389200--Sobic004G254800 Sobic004G078700 Sobic004G078700 Sobic001G389200--Sobic004G078700 Sobic007G172700 Sobic007G172700 Sobic001G389200--Sobic007G172700 Sobic001G389200--Sobic010G169900 Sobic009G122500 Sobic009G122500 Sobic001G389200--Sobic009G122500 Sobic003G034900 Sobic003G034900 Sobic001G465400--Sobic003G034900 Sobic006G012700 Sobic006G012700 Sobic001G465400--Sobic006G012700 Sobic001G115700 Sobic001G115700 Sobic001G465400--Sobic001G115700 Sobic001G465400--Sobic001G378200 Sobic001G465400--Sobic004G078700 Sobic004G000100 Sobic004G000100 Sobic001G465400--Sobic004G000100 Sobic001G047600 Sobic001G047600 Sobic001G465400--Sobic001G047600 Sobic001G465400--Sobic001G008100 Sobic004G347600 Sobic004G347600 Sobic001G465400--Sobic004G347600 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic001G378200--Sobic006G012700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400 Sobic003G193500 Sobic003G193500 Sobic004G354301--Sobic003G193500 Sobic001G467100 Sobic001G467100 Sobic004G354301--Sobic001G467100 Sobic001G049400 Sobic001G049400 Sobic004G354301--Sobic001G049400 Sobic003G394200 Sobic003G394200 Sobic004G354301--Sobic003G394200 Sobic004G354301--Sobic001G378200 Sobic001G358500 Sobic001G358500 Sobic004G354301--Sobic001G358500 Sobic007G056500 Sobic007G056500 Sobic004G354301--Sobic007G056500 Sobic010G243400 Sobic010G243400 Sobic004G354301--Sobic010G243400 Sobic004G028100 Sobic004G028100 Sobic004G354301--Sobic004G028100 Sobic007G218600 Sobic007G218600 Sobic007G148400--Sobic007G218600 Sobic003G308300 Sobic003G308300 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic003G255700 Sobic003G255700 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic007G148400--Sobic002G276800 Sobic001G424800 Sobic001G424800 Sobic003G058500--Sobic001G424800 Sobic010G181600 Sobic010G181600 Sobic003G058500--Sobic010G181600 Sobic003G058500--Sobic007G172700 Sobic003G058500--Sobic001G047600 Sobic004G350700 Sobic004G350700 Sobic003G058500--Sobic004G350700 Sobic003G058500--Sobic002G355800 Sobic001G378800 Sobic001G378800 Sobic003G058500--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic003G058500--Sobic008G152700 Sobic003G117800 Sobic003G117800 Sobic003G058500--Sobic003G117800 Sobic007G119600 Sobic007G119600 Sobic006G041800--Sobic007G119600 Sobic006G041800--Sobic001G008100 Sobic003G276100 Sobic003G276100 Sobic006G041800--Sobic003G276100 Sobic006G041800--Sobic001G485300 Sobic006G041800--Sobic002G276800 Sobic007G012900 Sobic007G012900 Sobic006G041800--Sobic007G012900 Sobic003G388700 Sobic003G388700 Sobic006G041800--Sobic003G388700 Sobic001G387800 Sobic001G387800 Sobic006G041800--Sobic001G387800 Sobic002G255400 Sobic002G255400 Sobic006G041800--Sobic002G255400
Octagon: transcription factors


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