Gene annotation
Transcriptome id Sobic.005G078950.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHN8
Pfam -
Panther DB PTHR32212 PTHR32212:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28410 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g09970.1 : OsFBX411 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G012590.1 , HORVU4Hr1G017290.4 , HORVU4Hr1G017290.3 , HORVU4Hr1G017290.2 , HORVU4Hr1G017290.1
Wheat TraesCS4A02G212300 , TraesCS6D02G068200 , TraesCS6B02G094000 , TraesCS4A02G038900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G278000 endonuclease/exonuclease/phosphatase family protein, putative, expressed K10772: AP endonuclease 2
2 Sobic.005G013200 BAH domain containing protein, expressed -
3 Sobic.008G028700 SET domain containing protein, expressed -
4 Sobic.006G209850 - -
5 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
6 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
7 Sobic.001G542700 expressed protein -
8 Sobic.010G136600 - -
9 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
10 Sobic.007G074600 tetratricopeptide repeat domain containing protein, expressed K15201: GTP3C3, general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
11 Sobic.003G052200 G-patch domain containing protein, expressed -
12 Sobic.002G357700 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
13 Sobic.006G038000 expressed protein -
14 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
15 Sobic.002G103600 glycosyl transferase, group 1 domain containing protein, expressed K03857: PIGA, phosphatidylinositol N-acetylglucosaminyltransferase subunit A
16 Sobic.007G090430 - -
17 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
18 Sobic.008G015500 RNA recognition motif containing protein, putative, expressed K13093: HIV Tat-specific factor 1
19 Sobic.004G219100 phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative, expressed K03859: PIGC, phosphatidylinositol N-acetylglucosaminyltransferase subunit C
20 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein


Gene co-expression network
sample Sobic005G078950 Sobic005G078950 Sobic002G278000 Sobic002G278000 Sobic005G078950--Sobic002G278000 Sobic005G013200 Sobic005G013200 Sobic005G078950--Sobic005G013200 Sobic008G028700 Sobic008G028700 Sobic005G078950--Sobic008G028700 Sobic006G209850 Sobic006G209850 Sobic005G078950--Sobic006G209850 Sobic009G260500 Sobic009G260500 Sobic005G078950--Sobic009G260500 Sobic004G009600 Sobic004G009600 Sobic005G078950--Sobic004G009600 Sobic001G542700 Sobic001G542700 Sobic005G078950--Sobic001G542700 Sobic010G136600 Sobic010G136600 Sobic005G078950--Sobic010G136600 Sobic001G167200 Sobic001G167200 Sobic005G078950--Sobic001G167200 Sobic002G063900 Sobic002G063900 Sobic002G278000--Sobic002G063900 Sobic006G116100 Sobic006G116100 Sobic002G278000--Sobic006G116100 Sobic002G278000--Sobic005G013200 Sobic001G511500 Sobic001G511500 Sobic002G278000--Sobic001G511500 Sobic008G149800 Sobic008G149800 Sobic002G278000--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic002G278000--Sobic005G015900 Sobic002G278000--Sobic008G028700 Sobic008G173100 Sobic008G173100 Sobic002G278000--Sobic008G173100 Sobic002G278000--Sobic001G167200 Sobic002G103600 Sobic002G103600 Sobic005G013200--Sobic002G103600 Sobic010G129200 Sobic010G129200 Sobic005G013200--Sobic010G129200 Sobic008G162900 Sobic008G162900 Sobic005G013200--Sobic008G162900 Sobic001G407200 Sobic001G407200 Sobic005G013200--Sobic001G407200 Sobic001G222500 Sobic001G222500 Sobic005G013200--Sobic001G222500 Sobic002G408200 Sobic002G408200 Sobic005G013200--Sobic002G408200 Sobic005G013200--Sobic008G028700 Sobic001G251700 Sobic001G251700 Sobic005G013200--Sobic001G251700 Sobic004G084300 Sobic004G084300 Sobic005G013200--Sobic004G084300 Sobic010G279450 Sobic010G279450 Sobic008G028700--Sobic010G279450 Sobic009G040600 Sobic009G040600 Sobic008G028700--Sobic009G040600 Sobic008G028700--Sobic004G009600 Sobic004G258700 Sobic004G258700 Sobic008G028700--Sobic004G258700 Sobic007G065400 Sobic007G065400 Sobic008G028700--Sobic007G065400 Sobic010G139000 Sobic010G139000 Sobic008G028700--Sobic010G139000 Sobic002G006900 Sobic002G006900 Sobic008G028700--Sobic002G006900 Sobic002G145101 Sobic002G145101 Sobic008G028700--Sobic002G145101 Sobic008G113100 Sobic008G113100 Sobic008G028700--Sobic008G113100 Sobic006G128900 Sobic006G128900 Sobic006G209850--Sobic006G128900 Sobic006G209850--Sobic001G511500 Sobic003G280800 Sobic003G280800 Sobic006G209850--Sobic003G280800 Sobic010G277500 Sobic010G277500 Sobic006G209850--Sobic010G277500 Sobic008G024600 Sobic008G024600 Sobic006G209850--Sobic008G024600 Sobic002G053000 Sobic002G053000 Sobic006G209850--Sobic002G053000 Sobic006G209850--Sobic010G129200 Sobic004G145500 Sobic004G145500 Sobic006G209850--Sobic004G145500 Sobic002G243900 Sobic002G243900 Sobic006G209850--Sobic002G243900 Sobic001G219600 Sobic001G219600 Sobic009G260500--Sobic001G219600 Sobic009G260500--Sobic004G009600 Sobic009G260500--Sobic010G277500 Sobic008G009700 Sobic008G009700 Sobic009G260500--Sobic008G009700 Sobic009G260500--Sobic010G139000 Sobic009G260500--Sobic008G028700 Sobic009G260500--Sobic009G040600 Sobic002G309600 Sobic002G309600 Sobic009G260500--Sobic002G309600 Sobic001G311500 Sobic001G311500 Sobic009G260500--Sobic001G311500 Sobic004G009600--Sobic009G040600 Sobic004G009600--Sobic008G028700 Sobic004G009600--Sobic009G260500 Sobic004G009600--Sobic010G279450 Sobic004G009600--Sobic002G309600 Sobic007G117400 Sobic007G117400 Sobic004G009600--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic004G009600--Sobic003G293200 Sobic001G363500 Sobic001G363500 Sobic004G009600--Sobic001G363500 Sobic004G009600--Sobic010G277500 Sobic001G542700--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic001G542700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic001G542700--Sobic001G241200 Sobic002G299700 Sobic002G299700 Sobic001G542700--Sobic002G299700 Sobic001G542700--Sobic007G117400 Sobic001G542700--Sobic003G293200 Sobic001G542700--Sobic009G040600 Sobic007G061700 Sobic007G061700 Sobic001G542700--Sobic007G061700 Sobic010G209400 Sobic010G209400 Sobic001G542700--Sobic010G209400 Sobic007G096600 Sobic007G096600 Sobic010G136600--Sobic007G096600 Sobic010G136600--Sobic004G145500 Sobic002G144933 Sobic002G144933 Sobic010G136600--Sobic002G144933 Sobic008G173900 Sobic008G173900 Sobic010G136600--Sobic008G173900 Sobic010G136600--Sobic008G028700 Sobic009G126400 Sobic009G126400 Sobic010G136600--Sobic009G126400 Sobic010G136600--Sobic010G277500 Sobic009G210500 Sobic009G210500 Sobic010G136600--Sobic009G210500 Sobic010G136600--Sobic004G009600 Sobic002G158700 Sobic002G158700 Sobic001G167200--Sobic002G158700 Sobic001G167200--Sobic009G210500 Sobic004G018300 Sobic004G018300 Sobic001G167200--Sobic004G018300 Sobic001G167200--Sobic005G015900 Sobic008G011100 Sobic008G011100 Sobic001G167200--Sobic008G011100 Sobic001G090400 Sobic001G090400 Sobic001G167200--Sobic001G090400 Sobic001G167200--Sobic001G219600 Sobic001G167200--Sobic010G136600 Sobic001G167200--Sobic010G065300
Octagon: transcription factors


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