Gene annotation
Transcriptome id Sobic.005G091200.1
Synonym
Functional annotation -
UniProt C5Y888
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G034700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein terpene synthase 6 (Os)(PubMedID : 27208977)@terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
2 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
3 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
4 Sobic.001G515500 LYM2 lysm domain GPI-anchored protein 2 precursor("PubMedID : 26759170,PubMedID : 24597475")@lysM domain-containing GPI-anchored protein precursor, putative, expressed K13473: chitin elicitor-binding protein
5 Sobic.001G222300 cyclin-dependent kinase inhibitor, putative, expressed -
6 Sobic.008G045450 - -
7 Sobic.001G326900 PPDK(PubMedID : 19549309)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
8 Sobic.010G218100 expressed protein -
9 Sobic.001G532000 OsFBX76 - F-box domain containing protein, expressed -
10 Sobic.007G150200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MTD1, putative, expressed -
11 Sobic.004G049100 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.003G117000 late embryogenesis abundant protein, putative, expressed -
13 Sobic.003G121400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@expressed protein -
14 Sobic.001G451000 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
15 Sobic.002G017300 expressed protein -
16 Sobic.002G284200 peroxisomal multifunctional enzyme type 2, putative, expressed -
17 Sobic.004G274700 SNARE associated Golgi protein, putative, expressed -
18 Sobic.002G082900 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
19 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
20 Sobic.003G036950 - -


Gene co-expression network
sample Sobic005G091200 Sobic005G091200 Sobic007G034700 Sobic007G034700 Sobic005G091200--Sobic007G034700 Sobic004G188300 Sobic004G188300 Sobic005G091200--Sobic004G188300 Sobic001G371300 Sobic001G371300 Sobic005G091200--Sobic001G371300 Sobic001G515500 Sobic001G515500 Sobic005G091200--Sobic001G515500 Sobic001G222300 Sobic001G222300 Sobic005G091200--Sobic001G222300 Sobic008G045450 Sobic008G045450 Sobic005G091200--Sobic008G045450 Sobic001G326900 Sobic001G326900 Sobic005G091200--Sobic001G326900 Sobic010G218100 Sobic010G218100 Sobic005G091200--Sobic010G218100 Sobic001G532000 Sobic001G532000 Sobic005G091200--Sobic001G532000 Sobic001G471900 Sobic001G471900 Sobic007G034700--Sobic001G471900 Sobic002G017300 Sobic002G017300 Sobic007G034700--Sobic002G017300 Sobic010G154150 Sobic010G154150 Sobic007G034700--Sobic010G154150 Sobic009G166700 Sobic009G166700 Sobic007G034700--Sobic009G166700 Sobic007G034700--Sobic001G515500 Sobic004G164500 Sobic004G164500 Sobic007G034700--Sobic004G164500 Sobic008G106800 Sobic008G106800 Sobic007G034700--Sobic008G106800 Sobic004G274700 Sobic004G274700 Sobic007G034700--Sobic004G274700 Sobic001G056700 Sobic001G056700 Sobic007G034700--Sobic001G056700 Sobic003G026300 Sobic003G026300 Sobic004G188300--Sobic003G026300 Sobic003G093600 Sobic003G093600 Sobic004G188300--Sobic003G093600 Sobic004G188300--Sobic001G222300 Sobic007G150200 Sobic007G150200 Sobic004G188300--Sobic007G150200 Sobic009G183500 Sobic009G183500 Sobic004G188300--Sobic009G183500 Sobic007G023700 Sobic007G023700 Sobic004G188300--Sobic007G023700 Sobic006G257900 Sobic006G257900 Sobic004G188300--Sobic006G257900 Sobic005G167300 Sobic005G167300 Sobic004G188300--Sobic005G167300 Sobic004G188300--Sobic010G218100 Sobic003G273100 Sobic003G273100 Sobic001G371300--Sobic003G273100 Sobic002G291300 Sobic002G291300 Sobic001G371300--Sobic002G291300 Sobic001G478300 Sobic001G478300 Sobic001G371300--Sobic001G478300 Sobic001G371300--Sobic004G274700 Sobic001G427800 Sobic001G427800 Sobic001G371300--Sobic001G427800 Sobic004G079100 Sobic004G079100 Sobic001G371300--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic001G371300--Sobic010G083700 Sobic001G371300--Sobic001G056700 Sobic001G149700 Sobic001G149700 Sobic001G371300--Sobic001G149700 Sobic001G381800 Sobic001G381800 Sobic001G515500--Sobic001G381800 Sobic003G311200 Sobic003G311200 Sobic001G515500--Sobic003G311200 Sobic001G515500--Sobic007G034700 Sobic003G396000 Sobic003G396000 Sobic001G515500--Sobic003G396000 Sobic009G011901 Sobic009G011901 Sobic001G515500--Sobic009G011901 Sobic002G382950 Sobic002G382950 Sobic001G515500--Sobic002G382950 Sobic001G082400 Sobic001G082400 Sobic001G515500--Sobic001G082400 Sobic001G076000 Sobic001G076000 Sobic001G515500--Sobic001G076000 Sobic001G071100 Sobic001G071100 Sobic001G515500--Sobic001G071100 Sobic007G037100 Sobic007G037100 Sobic001G222300--Sobic007G037100 Sobic005G162600 Sobic005G162600 Sobic001G222300--Sobic005G162600 Sobic008G101800 Sobic008G101800 Sobic001G222300--Sobic008G101800 Sobic007G211000 Sobic007G211000 Sobic001G222300--Sobic007G211000 Sobic001G222300--Sobic004G188300 Sobic002G001600 Sobic002G001600 Sobic001G222300--Sobic002G001600 Sobic001G451000 Sobic001G451000 Sobic001G222300--Sobic001G451000 Sobic008G116500 Sobic008G116500 Sobic001G222300--Sobic008G116500 Sobic002G284200 Sobic002G284200 Sobic001G222300--Sobic002G284200 Sobic008G045450--Sobic001G371300 Sobic001G204501 Sobic001G204501 Sobic008G045450--Sobic001G204501 Sobic008G045450--Sobic003G273100 Sobic001G247400 Sobic001G247400 Sobic008G045450--Sobic001G247400 Sobic008G045450--Sobic004G274700 Sobic002G272800 Sobic002G272800 Sobic008G045450--Sobic002G272800 Sobic001G295600 Sobic001G295600 Sobic008G045450--Sobic001G295600 Sobic008G045450--Sobic002G291300 Sobic003G296600 Sobic003G296600 Sobic008G045450--Sobic003G296600 Sobic003G117000 Sobic003G117000 Sobic001G326900--Sobic003G117000 Sobic003G036950 Sobic003G036950 Sobic001G326900--Sobic003G036950 Sobic001G326900--Sobic002G284200 Sobic001G326900--Sobic010G218100 Sobic001G326900--Sobic007G150200 Sobic002G082900 Sobic002G082900 Sobic001G326900--Sobic002G082900 Sobic005G117901 Sobic005G117901 Sobic001G326900--Sobic005G117901 Sobic010G218500 Sobic010G218500 Sobic001G326900--Sobic010G218500 Sobic001G326900--Sobic001G222300 Sobic010G218100--Sobic010G218500 Sobic010G218100--Sobic003G117000 Sobic006G122400 Sobic006G122400 Sobic010G218100--Sobic006G122400 Sobic010G218100--Sobic004G188300 Sobic010G218100--Sobic007G150200 Sobic010G218100--Sobic001G222300 Sobic002G039500 Sobic002G039500 Sobic010G218100--Sobic002G039500 Sobic002G253500 Sobic002G253500 Sobic010G218100--Sobic002G253500 Sobic009G242800 Sobic009G242800 Sobic010G218100--Sobic009G242800 Sobic001G532000--Sobic007G211000 Sobic006G082600 Sobic006G082600 Sobic001G532000--Sobic006G082600 Sobic006G173000 Sobic006G173000 Sobic001G532000--Sobic006G173000 Sobic010G124001 Sobic010G124001 Sobic001G532000--Sobic010G124001 Sobic001G532000--Sobic007G037100 Sobic007G145200 Sobic007G145200 Sobic001G532000--Sobic007G145200 Sobic001G532000--Sobic001G222300 Sobic004G208400 Sobic004G208400 Sobic001G532000--Sobic004G208400 Sobic001G024200 Sobic001G024200 Sobic001G532000--Sobic001G024200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.