Gene annotation
Transcriptome id Sobic.006G136200.3,Sobic.006G136200.2,Sobic.006G136200.4,Sobic.006G136200.1
Synonym ER, ATER, Sb06g021590
Functional annotation enhancer of rudimentary protein, putative, expressed
UniProt C5YBI5 , A0A1Z5RDR6
Pfam PF01133
Panther DB PTHR12373
NCBI CDD KOG1766; Enhancer of rudimentary
KEGG Orthology -
Gene Ontology GO:0007049; cell cycle GO:0006221pyrimidine nucleotide biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G10810 : enhancer of rudimentary protein, putative
RAP-DB (Rice) LOC_Os02g39830.1 : enhancer of rudimentary protein, putative, expressed
MaizeGDB (Corn) Zm00025a010800
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G136200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G133700 transcription factor RF2a, putative, expressed -
2 Sobic.001G154400 expp1 protein precursor, putative, expressed -
3 Sobic.001G127400 yippee zinc-binding protein, putative, expressed -
4 Sobic.006G267800 WD-40 repeat family protein, putative, expressed -
5 Sobic.001G328100 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.009G052500 RNA polymerase Rpb7, N-terminal domain containing protein, expressed K16253: NRPD7, DNA-directed RNA polymerase IV and V subunit 7
7 Sobic.004G078900 AGAP003371-PA, putative, expressed -
8 Sobic.001G424500 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
9 Sobic.004G083200 targeting protein for Xklp2, putative, expressed -
10 Sobic.002G051200 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
11 Sobic.004G242000 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
12 Sobic.001G034600 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
13 Sobic.009G105000 leaf senescence related protein, putative, expressed -
14 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
15 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
16 Sobic.004G225800 GEM, putative, expressed -
17 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.004G077900 YIF1B, putative, expressed -
19 Sobic.004G318400 MTD1, putative, expressed -
20 Sobic.004G122000 protein of unknown function DUF502 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G136200 Sobic006G136200 Sobic006G133700 Sobic006G133700 Sobic006G136200--Sobic006G133700 Sobic001G154400 Sobic001G154400 Sobic006G136200--Sobic001G154400 Sobic001G127400 Sobic001G127400 Sobic006G136200--Sobic001G127400 Sobic006G267800 Sobic006G267800 Sobic006G136200--Sobic006G267800 Sobic001G328100 Sobic001G328100 Sobic006G136200--Sobic001G328100 Sobic009G052500 Sobic009G052500 Sobic006G136200--Sobic009G052500 Sobic004G078900 Sobic004G078900 Sobic006G136200--Sobic004G078900 Sobic001G424500 Sobic001G424500 Sobic006G136200--Sobic001G424500 Sobic004G083200 Sobic004G083200 Sobic006G136200--Sobic004G083200 Sobic001G030400 Sobic001G030400 Sobic006G133700--Sobic001G030400 Sobic001G468500 Sobic001G468500 Sobic006G133700--Sobic001G468500 Sobic001G080200 Sobic001G080200 Sobic006G133700--Sobic001G080200 Sobic003G283600 Sobic003G283600 Sobic006G133700--Sobic003G283600 Sobic004G036800 Sobic004G036800 Sobic006G133700--Sobic004G036800 Sobic005G129700 Sobic005G129700 Sobic006G133700--Sobic005G129700 Sobic001G081100 Sobic001G081100 Sobic006G133700--Sobic001G081100 Sobic001G369800 Sobic001G369800 Sobic006G133700--Sobic001G369800 Sobic002G284100 Sobic002G284100 Sobic006G133700--Sobic002G284100 Sobic002G113500 Sobic002G113500 Sobic001G154400--Sobic002G113500 Sobic006G013900 Sobic006G013900 Sobic001G154400--Sobic006G013900 Sobic001G336050 Sobic001G336050 Sobic001G154400--Sobic001G336050 Sobic004G102900 Sobic004G102900 Sobic001G154400--Sobic004G102900 Sobic004G318400 Sobic004G318400 Sobic001G154400--Sobic004G318400 Sobic002G051200 Sobic002G051200 Sobic001G154400--Sobic002G051200 Sobic004G063500 Sobic004G063500 Sobic001G154400--Sobic004G063500 Sobic010G256200 Sobic010G256200 Sobic001G154400--Sobic010G256200 Sobic003G325700 Sobic003G325700 Sobic001G154400--Sobic003G325700 Sobic009G034400 Sobic009G034400 Sobic001G127400--Sobic009G034400 Sobic001G127400--Sobic001G424500 Sobic003G101300 Sobic003G101300 Sobic001G127400--Sobic003G101300 Sobic001G038100 Sobic001G038100 Sobic001G127400--Sobic001G038100 Sobic001G350501 Sobic001G350501 Sobic001G127400--Sobic001G350501 Sobic003G024800 Sobic003G024800 Sobic001G127400--Sobic003G024800 Sobic003G420700 Sobic003G420700 Sobic001G127400--Sobic003G420700 Sobic007G117100 Sobic007G117100 Sobic001G127400--Sobic007G117100 Sobic001G309100 Sobic001G309100 Sobic001G127400--Sobic001G309100 Sobic007G084200 Sobic007G084200 Sobic006G267800--Sobic007G084200 Sobic006G267800--Sobic001G369800 Sobic002G351100 Sobic002G351100 Sobic006G267800--Sobic002G351100 Sobic006G267800--Sobic002G284100 Sobic010G079100 Sobic010G079100 Sobic006G267800--Sobic010G079100 Sobic003G226700 Sobic003G226700 Sobic006G267800--Sobic003G226700 Sobic001G261549 Sobic001G261549 Sobic006G267800--Sobic001G261549 Sobic003G389100 Sobic003G389100 Sobic006G267800--Sobic003G389100 Sobic001G487200 Sobic001G487200 Sobic006G267800--Sobic001G487200 Sobic001G087300 Sobic001G087300 Sobic001G328100--Sobic001G087300 Sobic001G042500 Sobic001G042500 Sobic001G328100--Sobic001G042500 Sobic008G110200 Sobic008G110200 Sobic001G328100--Sobic008G110200 Sobic006G271300 Sobic006G271300 Sobic001G328100--Sobic006G271300 Sobic001G399300 Sobic001G399300 Sobic001G328100--Sobic001G399300 Sobic001G328100--Sobic006G136200 Sobic006G189700 Sobic006G189700 Sobic001G328100--Sobic006G189700 Sobic001G328100--Sobic001G154400 Sobic001G505300 Sobic001G505300 Sobic001G328100--Sobic001G505300 Sobic006G231700 Sobic006G231700 Sobic009G052500--Sobic006G231700 Sobic001G094500 Sobic001G094500 Sobic009G052500--Sobic001G094500 Sobic009G052500--Sobic002G051200 Sobic003G434000 Sobic003G434000 Sobic009G052500--Sobic003G434000 Sobic009G052500--Sobic006G013900 Sobic001G389400 Sobic001G389400 Sobic009G052500--Sobic001G389400 Sobic007G022500 Sobic007G022500 Sobic009G052500--Sobic007G022500 Sobic001G034600 Sobic001G034600 Sobic009G052500--Sobic001G034600 Sobic004G265700 Sobic004G265700 Sobic009G052500--Sobic004G265700 Sobic002G335300 Sobic002G335300 Sobic004G078900--Sobic002G335300 Sobic009G232800 Sobic009G232800 Sobic004G078900--Sobic009G232800 Sobic010G021100 Sobic010G021100 Sobic004G078900--Sobic010G021100 Sobic007G147600 Sobic007G147600 Sobic004G078900--Sobic007G147600 Sobic004G024200 Sobic004G024200 Sobic004G078900--Sobic004G024200 Sobic002G223600 Sobic002G223600 Sobic004G078900--Sobic002G223600 Sobic001G101500 Sobic001G101500 Sobic004G078900--Sobic001G101500 Sobic004G032000 Sobic004G032000 Sobic004G078900--Sobic004G032000 Sobic004G122000 Sobic004G122000 Sobic004G078900--Sobic004G122000 Sobic009G036900 Sobic009G036900 Sobic001G424500--Sobic009G036900 Sobic001G424500--Sobic009G034400 Sobic001G424500--Sobic001G127400 Sobic001G424500--Sobic003G101300 Sobic001G424500--Sobic003G024800 Sobic007G038800 Sobic007G038800 Sobic001G424500--Sobic007G038800 Sobic001G424500--Sobic004G122000 Sobic002G068300 Sobic002G068300 Sobic001G424500--Sobic002G068300 Sobic002G121000 Sobic002G121000 Sobic001G424500--Sobic002G121000 Sobic002G088700 Sobic002G088700 Sobic004G083200--Sobic002G088700 Sobic002G250400 Sobic002G250400 Sobic004G083200--Sobic002G250400 Sobic003G380500 Sobic003G380500 Sobic004G083200--Sobic003G380500 Sobic004G083200--Sobic004G122000 Sobic010G046400 Sobic010G046400 Sobic004G083200--Sobic010G046400 Sobic008G099500 Sobic008G099500 Sobic004G083200--Sobic008G099500 Sobic003G328800 Sobic003G328800 Sobic004G083200--Sobic003G328800 Sobic004G349100 Sobic004G349100 Sobic004G083200--Sobic004G349100 Sobic001G281700 Sobic001G281700 Sobic004G083200--Sobic001G281700
Octagon: transcription factors


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