Gene annotation
Transcriptome id Sobic.007G027000.1,Sobic.007G027000.3
Synonym Sb07g002352
Functional annotation expressed protein
UniProt A0A1B6PF58 , A0A1Z5R7S3
Pfam -
Panther DB PTHR31755 PTHR31755:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37920 : -
RAP-DB (Rice) LOC_Os01g20110.1,LOC_Os08g23160.1 : expressed protein
MaizeGDB (Corn) Zm00025a040371
Brachypodium KQJ95607
Barley HORVU5Hr1G049810.9 , HORVU5Hr1G049810.8 , HORVU5Hr1G049810.7 , HORVU5Hr1G049810.6 , HORVU5Hr1G049810.5 , HORVU5Hr1G049810.4 , HORVU5Hr1G049810.3 , HORVU5Hr1G049810.2 , HORVU5Hr1G049810.1 , HORVU5Hr1G049810.10
Wheat TraesCS5D02G164500 , TraesCS5B02G157200 , TraesCS5A02G159400
Populus -


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cDNA sequences
Sobic.007G027000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
2 Sobic.003G162800 expressed protein -
3 Sobic.001G445200 expressed protein -
4 Sobic.002G409900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spo0B-associated GTP-binding protein, putative, expressed -
5 Sobic.003G345900 histone deacetylase, putative, expressed -
6 Sobic.004G123300 oxidoreductase/ transition metal ion binding protein, putative, expressed -
7 Sobic.001G514100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.002G181132 - -
9 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
10 Sobic.003G045300 cobalt ion transporter, putative, expressed -
11 Sobic.004G255500 SET domain-containing protein, putative, expressed -
12 Sobic.001G375000 OsClp5 - Putative Clp protease homologue, expressed -
13 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
14 Sobic.005G197300 GTP-binding protein, putative, expressed K03977: engA, GTPase
15 Sobic.009G137000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
16 Sobic.003G128400 OsClp1 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
17 Sobic.010G027200 OsClp9 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.006G166500 expressed protein -
19 Sobic.005G009300 expressed protein -
20 Sobic.007G123600 GTPase of unknown function domain containing protein, putative, expressed K03650: mnmE, trmE, tRNA modification GTPase


Gene co-expression network
sample Sobic007G027000 Sobic007G027000 Sobic002G156100 Sobic002G156100 Sobic007G027000--Sobic002G156100 Sobic003G162800 Sobic003G162800 Sobic007G027000--Sobic003G162800 Sobic001G445200 Sobic001G445200 Sobic007G027000--Sobic001G445200 Sobic002G409900 Sobic002G409900 Sobic007G027000--Sobic002G409900 Sobic003G345900 Sobic003G345900 Sobic007G027000--Sobic003G345900 Sobic004G123300 Sobic004G123300 Sobic007G027000--Sobic004G123300 Sobic001G514100 Sobic001G514100 Sobic007G027000--Sobic001G514100 Sobic002G181132 Sobic002G181132 Sobic007G027000--Sobic002G181132 Sobic005G014700 Sobic005G014700 Sobic007G027000--Sobic005G014700 Sobic002G156100--Sobic003G162800 Sobic001G375000 Sobic001G375000 Sobic002G156100--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic002G156100--Sobic003G128400 Sobic001G382800 Sobic001G382800 Sobic002G156100--Sobic001G382800 Sobic003G045300 Sobic003G045300 Sobic002G156100--Sobic003G045300 Sobic010G255100 Sobic010G255100 Sobic002G156100--Sobic010G255100 Sobic008G067100 Sobic008G067100 Sobic002G156100--Sobic008G067100 Sobic002G156100--Sobic005G014700 Sobic001G424300 Sobic001G424300 Sobic002G156100--Sobic001G424300 Sobic003G162800--Sobic001G375000 Sobic003G327200 Sobic003G327200 Sobic003G162800--Sobic003G327200 Sobic003G162800--Sobic002G156100 Sobic003G162800--Sobic003G345900 Sobic003G162800--Sobic002G181132 Sobic004G003900 Sobic004G003900 Sobic003G162800--Sobic004G003900 Sobic003G162800--Sobic003G045300 Sobic003G162800--Sobic001G514100 Sobic010G027200 Sobic010G027200 Sobic003G162800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic001G445200--Sobic006G237100 Sobic005G009300 Sobic005G009300 Sobic001G445200--Sobic005G009300 Sobic001G437200 Sobic001G437200 Sobic001G445200--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic001G445200--Sobic001G281500 Sobic002G404900 Sobic002G404900 Sobic001G445200--Sobic002G404900 Sobic003G310100 Sobic003G310100 Sobic001G445200--Sobic003G310100 Sobic001G445200--Sobic002G156100 Sobic001G445200--Sobic002G409900 Sobic001G445200--Sobic003G162800 Sobic002G409900--Sobic001G445200 Sobic002G409900--Sobic005G009300 Sobic002G409900--Sobic007G027000 Sobic002G409900--Sobic002G156100 Sobic002G409900--Sobic003G345900 Sobic001G293300 Sobic001G293300 Sobic002G409900--Sobic001G293300 Sobic002G409900--Sobic003G162800 Sobic003G158300 Sobic003G158300 Sobic002G409900--Sobic003G158300 Sobic002G409900--Sobic002G404900 Sobic003G345900--Sobic003G162800 Sobic003G345900--Sobic004G003900 Sobic003G345900--Sobic002G181132 Sobic003G345900--Sobic001G375000 Sobic006G088000 Sobic006G088000 Sobic003G345900--Sobic006G088000 Sobic003G345900--Sobic002G156100 Sobic003G345900--Sobic010G027200 Sobic006G217000 Sobic006G217000 Sobic003G345900--Sobic006G217000 Sobic004G263200 Sobic004G263200 Sobic003G345900--Sobic004G263200 Sobic004G123300--Sobic007G027000 Sobic001G381900 Sobic001G381900 Sobic004G123300--Sobic001G381900 Sobic007G123600 Sobic007G123600 Sobic004G123300--Sobic007G123600 Sobic003G019000 Sobic003G019000 Sobic004G123300--Sobic003G019000 Sobic004G241700 Sobic004G241700 Sobic004G123300--Sobic004G241700 Sobic004G119500 Sobic004G119500 Sobic004G123300--Sobic004G119500 Sobic004G123600 Sobic004G123600 Sobic004G123300--Sobic004G123600 Sobic003G396300 Sobic003G396300 Sobic004G123300--Sobic003G396300 Sobic009G137000 Sobic009G137000 Sobic004G123300--Sobic009G137000 Sobic001G514100--Sobic003G162800 Sobic001G514100--Sobic001G281500 Sobic001G514100--Sobic003G327200 Sobic005G197300 Sobic005G197300 Sobic001G514100--Sobic005G197300 Sobic001G514100--Sobic001G375000 Sobic001G514100--Sobic003G128400 Sobic001G494500 Sobic001G494500 Sobic001G514100--Sobic001G494500 Sobic002G297400 Sobic002G297400 Sobic001G514100--Sobic002G297400 Sobic001G514100--Sobic001G382800 Sobic006G166500 Sobic006G166500 Sobic002G181132--Sobic006G166500 Sobic002G181132--Sobic003G045300 Sobic002G181132--Sobic004G003900 Sobic002G181132--Sobic001G375000 Sobic002G181132--Sobic003G162800 Sobic008G090900 Sobic008G090900 Sobic002G181132--Sobic008G090900 Sobic009G092900 Sobic009G092900 Sobic002G181132--Sobic009G092900 Sobic002G181132--Sobic003G345900 Sobic002G181132--Sobic002G156100 Sobic003G067100 Sobic003G067100 Sobic005G014700--Sobic003G067100 Sobic001G102500 Sobic001G102500 Sobic005G014700--Sobic001G102500 Sobic002G043600 Sobic002G043600 Sobic005G014700--Sobic002G043600 Sobic001G327800 Sobic001G327800 Sobic005G014700--Sobic001G327800 Sobic005G014700--Sobic010G255100 Sobic004G238900 Sobic004G238900 Sobic005G014700--Sobic004G238900 Sobic004G163800 Sobic004G163800 Sobic005G014700--Sobic004G163800 Sobic005G014700--Sobic002G156100 Sobic001G032700 Sobic001G032700 Sobic005G014700--Sobic001G032700
Octagon: transcription factors


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