Gene annotation
Transcriptome id Sobic.007G032300.1,Sobic.007G032300.2
Synonym Sb07g002800
Functional annotation expressed protein
UniProt C5YN01 , Q7FS93
Pfam -
Panther DB PTHR33974 PTHR33974:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21710 : -
RAP-DB (Rice) LOC_Os04g53560.1 : expressed protein
MaizeGDB (Corn) Zm00025a055279
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G043000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
2 Sobic.009G229200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
3 Sobic.001G292700 crcB-like protein, expressed -
4 Sobic.001G076400 H-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
5 Sobic.009G016000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
6 Sobic.002G138100 ACT domain containing protein, expressed -
7 Sobic.004G203400 repressor of RNA polymerase III transcription MAF1, putative, expressed -
8 Sobic.002G401100 methyltransferase, putative, expressed -
9 Sobic.004G035900 expressed protein -
10 Sobic.003G005000 expressed protein -
11 Sobic.008G180800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carotenoid biosynthesi(PubMedID : 18162592)@phytoene synthase, chloroplast precursor, putative, expressed K02291: 15-cis-phytoene synthase
12 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
13 Sobic.001G020100 expressed protein -
14 Sobic.004G269000 syntaxin, putative, expressed K08488: syntaxin 7
15 Sobic.005G036800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-binding protein, putative, expressed -
16 Sobic.003G139500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CDPK - CBL-interacting protein kinase 1(PubMedID : 31721651)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
17 Sobic.003G380600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrion protein, putative, expressed -
18 Sobic.008G064700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VTC2, putative, expressed K14190: GDP-L-galactose phosphorylase
19 Sobic.007G090900 heat shock protein-related, putative, expressed -
20 Sobic.003G319800 bHelix-loop-helix transcription factor, putative, expressed -


Gene co-expression network
sample Sobic007G032300 Sobic007G032300 Sobic001G043000 Sobic001G043000 Sobic007G032300--Sobic001G043000 Sobic009G229200 Sobic009G229200 Sobic007G032300--Sobic009G229200 Sobic001G292700 Sobic001G292700 Sobic007G032300--Sobic001G292700 Sobic001G076400 Sobic001G076400 Sobic007G032300--Sobic001G076400 Sobic009G016000 Sobic009G016000 Sobic007G032300--Sobic009G016000 Sobic002G138100 Sobic002G138100 Sobic007G032300--Sobic002G138100 Sobic004G203400 Sobic004G203400 Sobic007G032300--Sobic004G203400 Sobic002G401100 Sobic002G401100 Sobic007G032300--Sobic002G401100 Sobic004G035900 Sobic004G035900 Sobic007G032300--Sobic004G035900 Sobic006G153400 Sobic006G153400 Sobic001G043000--Sobic006G153400 Sobic003G139500 Sobic003G139500 Sobic001G043000--Sobic003G139500 Sobic010G104800 Sobic010G104800 Sobic001G043000--Sobic010G104800 Sobic001G073300 Sobic001G073300 Sobic001G043000--Sobic001G073300 Sobic009G256100 Sobic009G256100 Sobic001G043000--Sobic009G256100 Sobic010G249700 Sobic010G249700 Sobic001G043000--Sobic010G249700 Sobic001G043000--Sobic004G035900 Sobic003G127800 Sobic003G127800 Sobic001G043000--Sobic003G127800 Sobic010G039500 Sobic010G039500 Sobic001G043000--Sobic010G039500 Sobic002G134001 Sobic002G134001 Sobic009G229200--Sobic002G134001 Sobic009G229200--Sobic004G203400 Sobic003G264200 Sobic003G264200 Sobic009G229200--Sobic003G264200 Sobic009G165800 Sobic009G165800 Sobic009G229200--Sobic009G165800 Sobic001G391600 Sobic001G391600 Sobic009G229200--Sobic001G391600 Sobic009G005900 Sobic009G005900 Sobic009G229200--Sobic009G005900 Sobic004G130100 Sobic004G130100 Sobic009G229200--Sobic004G130100 Sobic003G010400 Sobic003G010400 Sobic009G229200--Sobic003G010400 Sobic009G174900 Sobic009G174900 Sobic009G229200--Sobic009G174900 Sobic001G292700--Sobic003G127800 Sobic001G292700--Sobic001G043000 Sobic001G491000 Sobic001G491000 Sobic001G292700--Sobic001G491000 Sobic001G263100 Sobic001G263100 Sobic001G292700--Sobic001G263100 Sobic003G097600 Sobic003G097600 Sobic001G292700--Sobic003G097600 Sobic004G151800 Sobic004G151800 Sobic001G292700--Sobic004G151800 Sobic004G154200 Sobic004G154200 Sobic001G292700--Sobic004G154200 Sobic001G292700--Sobic006G153400 Sobic003G319800 Sobic003G319800 Sobic001G292700--Sobic003G319800 Sobic001G261545 Sobic001G261545 Sobic001G076400--Sobic001G261545 Sobic009G103000 Sobic009G103000 Sobic001G076400--Sobic009G103000 Sobic007G010800 Sobic007G010800 Sobic001G076400--Sobic007G010800 Sobic001G076400--Sobic002G138100 Sobic005G132000 Sobic005G132000 Sobic001G076400--Sobic005G132000 Sobic006G233700 Sobic006G233700 Sobic001G076400--Sobic006G233700 Sobic008G077500 Sobic008G077500 Sobic001G076400--Sobic008G077500 Sobic003G003450 Sobic003G003450 Sobic001G076400--Sobic003G003450 Sobic006G232600 Sobic006G232600 Sobic001G076400--Sobic006G232600 Sobic009G016000--Sobic003G139500 Sobic009G246300 Sobic009G246300 Sobic009G016000--Sobic009G246300 Sobic010G183600 Sobic010G183600 Sobic009G016000--Sobic010G183600 Sobic008G180800 Sobic008G180800 Sobic009G016000--Sobic008G180800 Sobic009G016000--Sobic001G043000 Sobic007G121300 Sobic007G121300 Sobic009G016000--Sobic007G121300 Sobic003G428600 Sobic003G428600 Sobic009G016000--Sobic003G428600 Sobic001G331600 Sobic001G331600 Sobic009G016000--Sobic001G331600 Sobic010G104700 Sobic010G104700 Sobic009G016000--Sobic010G104700 Sobic001G394800 Sobic001G394800 Sobic002G138100--Sobic001G394800 Sobic002G138100--Sobic007G010800 Sobic009G040400 Sobic009G040400 Sobic002G138100--Sobic009G040400 Sobic009G228100 Sobic009G228100 Sobic002G138100--Sobic009G228100 Sobic001G169900 Sobic001G169900 Sobic002G138100--Sobic001G169900 Sobic003G103300 Sobic003G103300 Sobic002G138100--Sobic003G103300 Sobic002G138100--Sobic003G003450 Sobic003G057233 Sobic003G057233 Sobic002G138100--Sobic003G057233 Sobic002G356900 Sobic002G356900 Sobic002G138100--Sobic002G356900 Sobic004G203400--Sobic009G229200 Sobic010G042100 Sobic010G042100 Sobic004G203400--Sobic010G042100 Sobic001G388200 Sobic001G388200 Sobic004G203400--Sobic001G388200 Sobic004G203400--Sobic002G134001 Sobic004G203400--Sobic009G165800 Sobic003G117900 Sobic003G117900 Sobic004G203400--Sobic003G117900 Sobic001G314500 Sobic001G314500 Sobic004G203400--Sobic001G314500 Sobic010G083700 Sobic010G083700 Sobic004G203400--Sobic010G083700 Sobic006G232200 Sobic006G232200 Sobic004G203400--Sobic006G232200 Sobic009G249900 Sobic009G249900 Sobic002G401100--Sobic009G249900 Sobic003G345400 Sobic003G345400 Sobic002G401100--Sobic003G345400 Sobic002G054300 Sobic002G054300 Sobic002G401100--Sobic002G054300 Sobic004G028500 Sobic004G028500 Sobic002G401100--Sobic004G028500 Sobic007G173200 Sobic007G173200 Sobic002G401100--Sobic007G173200 Sobic010G184100 Sobic010G184100 Sobic002G401100--Sobic010G184100 Sobic004G164400 Sobic004G164400 Sobic002G401100--Sobic004G164400 Sobic009G034200 Sobic009G034200 Sobic002G401100--Sobic009G034200 Sobic001G207700 Sobic001G207700 Sobic002G401100--Sobic001G207700 Sobic003G005000 Sobic003G005000 Sobic004G035900--Sobic003G005000 Sobic001G283100 Sobic001G283100 Sobic004G035900--Sobic001G283100 Sobic001G485100 Sobic001G485100 Sobic004G035900--Sobic001G485100 Sobic004G035900--Sobic003G003450 Sobic004G035900--Sobic001G331600 Sobic007G157300 Sobic007G157300 Sobic004G035900--Sobic007G157300 Sobic008G149100 Sobic008G149100 Sobic004G035900--Sobic008G149100 Sobic001G015200 Sobic001G015200 Sobic004G035900--Sobic001G015200 Sobic003G228300 Sobic003G228300 Sobic004G035900--Sobic003G228300
Octagon: transcription factors


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