Gene annotation
Transcriptome id Sobic.009G018000.1
Synonym Sb09g001710
Functional annotation expressed protein
UniProt C5YYX4
Pfam PF14383 PF14309 PF12552
Panther DB PTHR21726 PTHR21726:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G53540 : -
RAP-DB (Rice) LOC_Os05g02580.1 : expressed protein
MaizeGDB (Corn) Zm00025a040843
Brachypodium PNT71923 , PNT71922
Barley -
Wheat TraesCS1A02G046100 , TraesCS1A02G046100 , TraesCS1D02G046700 , TraesCS1B02G059500 , TraesCS1B02G059500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G229100 OsFBX61 - F-box domain containing protein, expressed -
2 Sobic.007G046900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
3 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
4 Sobic.003G132700 OsFBX237 - F-box domain containing protein, expressed -
5 Sobic.002G089900 OsFBX237 - F-box domain containing protein, expressed -
6 Sobic.004G078100 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
7 Sobic.008G057000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
8 Sobic.010G013500 growth-regulating factor, putative, expressed -
9 Sobic.002G223300 nucleoporin p58/p45, putative, expressed K14307: NUPL1, nucleoporin p58/p45
10 Sobic.001G217100 double-stranded RNA binding motif containing protein, expressed -
11 Sobic.009G239301 - -
12 Sobic.006G210200 zinc finger domain, LSD1 subclass family protein, expressed -
13 Sobic.001G130700 domain of unknown function DUF966 domain containing protein, expressed -
14 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
15 Sobic.006G252000 - -
16 Sobic.010G194700 ARID/BRIGHT DNA-binding domain-containing protein, putative, expressed -
17 Sobic.006G126600 Trihelix Family(PubMedID : 24864043)@MYB family transcription factor, putative, expressed -
18 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
19 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
20 Sobic.005G177900 HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6


Gene co-expression network
sample Sobic009G018000 Sobic009G018000 Sobic004G229100 Sobic004G229100 Sobic009G018000--Sobic004G229100 Sobic007G046900 Sobic007G046900 Sobic009G018000--Sobic007G046900 Sobic009G192500 Sobic009G192500 Sobic009G018000--Sobic009G192500 Sobic003G132700 Sobic003G132700 Sobic009G018000--Sobic003G132700 Sobic002G089900 Sobic002G089900 Sobic009G018000--Sobic002G089900 Sobic004G078100 Sobic004G078100 Sobic009G018000--Sobic004G078100 Sobic008G057000 Sobic008G057000 Sobic009G018000--Sobic008G057000 Sobic010G013500 Sobic010G013500 Sobic009G018000--Sobic010G013500 Sobic002G223300 Sobic002G223300 Sobic009G018000--Sobic002G223300 Sobic001G217100 Sobic001G217100 Sobic004G229100--Sobic001G217100 Sobic004G229100--Sobic004G078100 Sobic004G229100--Sobic009G192500 Sobic004G229100--Sobic003G132700 Sobic004G229100--Sobic007G046900 Sobic009G164900 Sobic009G164900 Sobic004G229100--Sobic009G164900 Sobic004G229100--Sobic002G089900 Sobic004G229100--Sobic009G018000 Sobic002G095700 Sobic002G095700 Sobic004G229100--Sobic002G095700 Sobic007G046900--Sobic004G078100 Sobic002G060450 Sobic002G060450 Sobic007G046900--Sobic002G060450 Sobic007G046900--Sobic002G223300 Sobic002G018600 Sobic002G018600 Sobic007G046900--Sobic002G018600 Sobic001G215400 Sobic001G215400 Sobic007G046900--Sobic001G215400 Sobic007G046900--Sobic002G095700 Sobic009G239301 Sobic009G239301 Sobic007G046900--Sobic009G239301 Sobic007G046900--Sobic002G089900 Sobic003G433500 Sobic003G433500 Sobic007G046900--Sobic003G433500 Sobic009G192500--Sobic003G132700 Sobic007G117100 Sobic007G117100 Sobic009G192500--Sobic007G117100 Sobic002G430900 Sobic002G430900 Sobic009G192500--Sobic002G430900 Sobic009G022100 Sobic009G022100 Sobic009G192500--Sobic009G022100 Sobic007G125700 Sobic007G125700 Sobic009G192500--Sobic007G125700 Sobic009G192500--Sobic002G095700 Sobic003G253400 Sobic003G253400 Sobic009G192500--Sobic003G253400 Sobic009G192500--Sobic002G223300 Sobic009G192500--Sobic004G229100 Sobic003G132700--Sobic009G192500 Sobic003G354100 Sobic003G354100 Sobic003G132700--Sobic003G354100 Sobic003G132700--Sobic007G117100 Sobic003G132700--Sobic002G089900 Sobic002G014700 Sobic002G014700 Sobic003G132700--Sobic002G014700 Sobic003G132700--Sobic002G223300 Sobic002G334600 Sobic002G334600 Sobic003G132700--Sobic002G334600 Sobic003G132700--Sobic003G433500 Sobic001G507400 Sobic001G507400 Sobic003G132700--Sobic001G507400 Sobic002G089900--Sobic004G078100 Sobic009G044900 Sobic009G044900 Sobic002G089900--Sobic009G044900 Sobic002G089900--Sobic003G433500 Sobic006G248500 Sobic006G248500 Sobic002G089900--Sobic006G248500 Sobic002G089900--Sobic003G132700 Sobic002G089900--Sobic002G095700 Sobic002G089900--Sobic007G117100 Sobic004G013600 Sobic004G013600 Sobic002G089900--Sobic004G013600 Sobic002G259800 Sobic002G259800 Sobic002G089900--Sobic002G259800 Sobic004G078100--Sobic002G089900 Sobic004G078100--Sobic003G433500 Sobic004G078100--Sobic007G046900 Sobic004G078100--Sobic002G095700 Sobic002G151600 Sobic002G151600 Sobic004G078100--Sobic002G151600 Sobic003G173950 Sobic003G173950 Sobic004G078100--Sobic003G173950 Sobic003G197800 Sobic003G197800 Sobic004G078100--Sobic003G197800 Sobic002G058300 Sobic002G058300 Sobic004G078100--Sobic002G058300 Sobic005G021500 Sobic005G021500 Sobic004G078100--Sobic005G021500 Sobic003G409200 Sobic003G409200 Sobic008G057000--Sobic003G409200 Sobic005G200800 Sobic005G200800 Sobic008G057000--Sobic005G200800 Sobic001G346900 Sobic001G346900 Sobic008G057000--Sobic001G346900 Sobic004G086200 Sobic004G086200 Sobic008G057000--Sobic004G086200 Sobic002G148400 Sobic002G148400 Sobic008G057000--Sobic002G148400 Sobic010G279900 Sobic010G279900 Sobic008G057000--Sobic010G279900 Sobic001G484200 Sobic001G484200 Sobic008G057000--Sobic001G484200 Sobic009G032200 Sobic009G032200 Sobic008G057000--Sobic009G032200 Sobic007G183300 Sobic007G183300 Sobic008G057000--Sobic007G183300 Sobic009G000600 Sobic009G000600 Sobic010G013500--Sobic009G000600 Sobic004G199200 Sobic004G199200 Sobic010G013500--Sobic004G199200 Sobic006G022400 Sobic006G022400 Sobic010G013500--Sobic006G022400 Sobic010G013500--Sobic002G223300 Sobic002G284400 Sobic002G284400 Sobic010G013500--Sobic002G284400 Sobic001G290500 Sobic001G290500 Sobic010G013500--Sobic001G290500 Sobic001G372900 Sobic001G372900 Sobic010G013500--Sobic001G372900 Sobic006G281900 Sobic006G281900 Sobic010G013500--Sobic006G281900 Sobic005G120600 Sobic005G120600 Sobic010G013500--Sobic005G120600 Sobic002G223300--Sobic002G334600 Sobic004G085300 Sobic004G085300 Sobic002G223300--Sobic004G085300 Sobic009G151200 Sobic009G151200 Sobic002G223300--Sobic009G151200 Sobic002G223300--Sobic003G132700 Sobic002G223300--Sobic007G046900 Sobic004G285000 Sobic004G285000 Sobic002G223300--Sobic004G285000 Sobic006G210200 Sobic006G210200 Sobic002G223300--Sobic006G210200 Sobic002G050500 Sobic002G050500 Sobic002G223300--Sobic002G050500 Sobic002G339800 Sobic002G339800 Sobic002G223300--Sobic002G339800
Octagon: transcription factors


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