Gene annotation
| Transcriptome id | Sobic.009G080900.1 |
|---|---|
| Synonym | SbSWEET9-1;Sugars Will Eventually Be Exported Transporters, SbSWEET9-1 |
| Functional annotation | Sugar transporter (PubMedID : 27330561) Sugar transporter (PubMedID : 27330561) nodulin MtN3 family protein, putative, expressed |
| UniProt | A0A1B6P7B7 |
| Pfam | PF03083 |
| Panther DB | PTHR10791 PTHR10791:SF58 |
| NCBI CDD | KOG1623; Multitransmembrane protein |
| KEGG Orthology | K15382; SLC50A, solute carrier family 50 (sugar transporter) |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G53190 : Nodulin MtN3 family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os05g12320.1 : nodulin MtN3 family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a037585 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.009G080900 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G124500 | methyltransferase, putative, expressed | - |
| 2 | Sobic.002G072500 | expressed protein | - |
| 3 | Sobic.005G005400 | MATE efflux family protein(PubMedID : 26465154)@MATE efflux protein, putative, expressed | - |
| 4 | Sobic.001G411100 | expressed protein | - |
| 5 | Sobic.001G509200 | "similar to 9,10-9',10' carotenoid cleavage dioxygenase 1"(PubMedID : 29862293)@carotenoid cleavage dioxygenase, putative, expressed | K11159: carotenoid cleavage oxygenase |
| 6 | Sobic.007G166300 | PPDK(PubMedID : 19549309)@lactate/malate dehydrogenase family protein(PubMedID : 26465154)@NADP-malete dehydrogenase(PubMedID : 26904072)@-(PubMedID : 26976818)@"enzyme exhibits extensions at both the N- and C-termini, Chloroplast Enzyme"(PubMedID : 2373367)@lactate/malate dehydrogenase, putative, expressed | K00051: malate dehydrogenase (NADP+) |
| 7 | Sobic.001G393300 | HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed | - |
| 8 | Sobic.004G103300 | Complex I intermediate-associated protein 30 domain containing protein, putative, expressed | - |
| 9 | Sobic.002G030900 | oxidoreductase, aldo/keto reductase family protein, putative, expressed | - |
| 10 | Sobic.004G046500 | GTP-binding protein lepA, putative, expressed | K03596: GTP-binding protein LepA |
| 11 | Sobic.006G097500 | zeaxanthin epoxidase, chloroplast precursor, putative, expressed | K09838: ZEP, zeaxanthin epoxidase |
| 12 | Sobic.001G368600 | NAD dependent epimerase/dehydratase family protein, putative, expressed | - |
| 13 | Sobic.001G104600 | expressed protein | - |
| 14 | Sobic.007G046950 | - | - |
| 15 | Sobic.003G103300 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed | K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase |
| 16 | Sobic.010G101000 | peptide methionine sulfoxide reductase msrB, putative, expressed | K07305: peptide-methionine (R)-S-oxide reductase |
| 17 | Sobic.002G351200 | hydrolase, alpha/beta fold family domain containing protein, expressed | - |
| 18 | Sobic.001G015200 | Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed | - |
| 19 | Sobic.005G028800 | astaxanthin synthase KC28, putative, expressed | - |
| 20 | Sobic.007G108900 | APE1, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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