Gene annotation
Transcriptome id Sobic.010G169300.1
Synonym Sb10g022220
Functional annotation T-complex protein, putative, expressed
UniProt C5Z4P5
Pfam PF00118
Panther DB PTHR11353
NCBI CDD -
KEGG Orthology K09497; T-complex protein 1 subunit epsilon
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT1G24510 : TCP-1/cpn60 chaperonin family protein
RAP-DB (Rice) LOC_Os06g36700.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a016223 , Zm00025a044918
Brachypodium KQJ97872 , KQK17964
Barley HORVU1Hr1G054530.18 , HORVU1Hr1G054530.19 , HORVU1Hr1G054530.10 , HORVU1Hr1G054530.11 , HORVU1Hr1G054530.12 , HORVU1Hr1G054530.13 , HORVU1Hr1G054530.14 , HORVU1Hr1G054530.16 , HORVU1Hr1G054530.29 , HORVU1Hr1G054530.28 , HORVU1Hr1G054530.25 , HORVU1Hr1G054530.24 , HORVU1Hr1G054530.27 , HORVU1Hr1G054530.26 , HORVU1Hr1G054530.21 , HORVU1Hr1G054530.20 , HORVU1Hr1G054530.23 , HORVU1Hr1G054530.22 , HORVU1Hr1G054530.8 , HORVU1Hr1G054530.9 , HORVU1Hr1G054530.2 , HORVU1Hr1G054530.3 , HORVU1Hr1G054530.1 , HORVU1Hr1G054530.6 , HORVU1Hr1G054530.7 , HORVU1Hr1G054530.4 , HORVU1Hr1G054530.15 , HORVU7Hr1G088080.1 , HORVU1Hr1G054530.17
Wheat TraesCS1B02G227600 , TraesCS7B02G269300 , TraesCS7B02G269300 , TraesCS7B02G269300 , TraesCS7D02G364400 , TraesCS7A02G358400 , TraesCS7D02G364400 , TraesCS1D02G216600 , TraesCS1A02G213800
Populus -


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cDNA sequences
Sobic.010G169300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G193500 DnaK family protein, putative, expressed K04043: dnaK, molecular chaperone DnaK
2 Sobic.004G208500 eukaryotic translation initiation factor 2A, putative, expressed K15026: translation initiation factor 2A
3 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
4 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
5 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
6 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
7 Sobic.001G023100 ACBP4, putative, expressed -
8 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
9 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
10 Sobic.002G141700 unc-50, putative, expressed -
11 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
12 Sobic.009G134900 PPR repeat domain containing protein, putative, expressed -
13 Sobic.002G014400 T-complex protein, putative, expressed K09497: T-complex protein 1 subunit epsilon
14 Sobic.010G081700 PPR repeat domain containing protein, putative, expressed -
15 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
16 Sobic.001G490500 conserved oligomeric Golgi complex component 4, related, putative, expressed -
17 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
18 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
19 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
20 Sobic.004G357400 beta-catenin-like protein 1, putative, expressed K12864: beta-catenin-like protein 1


Gene co-expression network
sample Sobic010G169300 Sobic010G169300 Sobic001G193500 Sobic001G193500 Sobic010G169300--Sobic001G193500 Sobic004G208500 Sobic004G208500 Sobic010G169300--Sobic004G208500 Sobic009G077600 Sobic009G077600 Sobic010G169300--Sobic009G077600 Sobic004G207900 Sobic004G207900 Sobic010G169300--Sobic004G207900 Sobic007G177300 Sobic007G177300 Sobic010G169300--Sobic007G177300 Sobic001G467100 Sobic001G467100 Sobic010G169300--Sobic001G467100 Sobic001G023100 Sobic001G023100 Sobic010G169300--Sobic001G023100 Sobic001G460500 Sobic001G460500 Sobic010G169300--Sobic001G460500 Sobic001G161700 Sobic001G161700 Sobic010G169300--Sobic001G161700 Sobic001G193500--Sobic010G169300 Sobic002G116500 Sobic002G116500 Sobic001G193500--Sobic002G116500 Sobic002G014400 Sobic002G014400 Sobic001G193500--Sobic002G014400 Sobic001G193500--Sobic007G177300 Sobic008G016100 Sobic008G016100 Sobic001G193500--Sobic008G016100 Sobic001G471000 Sobic001G471000 Sobic001G193500--Sobic001G471000 Sobic001G193500--Sobic001G467100 Sobic001G193500--Sobic009G077600 Sobic005G163700 Sobic005G163700 Sobic001G193500--Sobic005G163700 Sobic004G208500--Sobic001G467100 Sobic001G099900 Sobic001G099900 Sobic004G208500--Sobic001G099900 Sobic001G015400 Sobic001G015400 Sobic004G208500--Sobic001G015400 Sobic002G408900 Sobic002G408900 Sobic004G208500--Sobic002G408900 Sobic002G150700 Sobic002G150700 Sobic004G208500--Sobic002G150700 Sobic004G208500--Sobic001G161700 Sobic010G223300 Sobic010G223300 Sobic004G208500--Sobic010G223300 Sobic005G110499 Sobic005G110499 Sobic004G208500--Sobic005G110499 Sobic004G208500--Sobic005G163700 Sobic003G209200 Sobic003G209200 Sobic009G077600--Sobic003G209200 Sobic008G055900 Sobic008G055900 Sobic009G077600--Sobic008G055900 Sobic006G260500 Sobic006G260500 Sobic009G077600--Sobic006G260500 Sobic009G077600--Sobic004G207900 Sobic004G100200 Sobic004G100200 Sobic009G077600--Sobic004G100200 Sobic006G239400 Sobic006G239400 Sobic009G077600--Sobic006G239400 Sobic007G005500 Sobic007G005500 Sobic009G077600--Sobic007G005500 Sobic003G050900 Sobic003G050900 Sobic009G077600--Sobic003G050900 Sobic009G077600--Sobic010G223300 Sobic004G207900--Sobic001G161700 Sobic004G207900--Sobic009G077600 Sobic004G207900--Sobic004G100200 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic007G177300--Sobic008G129600 Sobic007G177300--Sobic001G467100 Sobic009G231700 Sobic009G231700 Sobic007G177300--Sobic009G231700 Sobic001G382600 Sobic001G382600 Sobic007G177300--Sobic001G382600 Sobic010G020400 Sobic010G020400 Sobic007G177300--Sobic010G020400 Sobic002G394600 Sobic002G394600 Sobic007G177300--Sobic002G394600 Sobic007G177300--Sobic009G077600 Sobic007G177300--Sobic002G014400 Sobic008G103300 Sobic008G103300 Sobic007G177300--Sobic008G103300 Sobic001G467100--Sobic004G208500 Sobic010G172400 Sobic010G172400 Sobic001G467100--Sobic010G172400 Sobic001G474400 Sobic001G474400 Sobic001G467100--Sobic001G474400 Sobic001G467100--Sobic001G099900 Sobic003G222700 Sobic003G222700 Sobic001G467100--Sobic003G222700 Sobic007G145400 Sobic007G145400 Sobic001G467100--Sobic007G145400 Sobic005G114500 Sobic005G114500 Sobic001G467100--Sobic005G114500 Sobic001G467100--Sobic001G161700 Sobic001G467100--Sobic005G110499 Sobic002G029300 Sobic002G029300 Sobic001G023100--Sobic002G029300 Sobic007G173700 Sobic007G173700 Sobic001G023100--Sobic007G173700 Sobic009G226400 Sobic009G226400 Sobic001G023100--Sobic009G226400 Sobic001G023100--Sobic008G055900 Sobic001G023100--Sobic001G161700 Sobic008G072200 Sobic008G072200 Sobic001G023100--Sobic008G072200 Sobic001G193100 Sobic001G193100 Sobic001G023100--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G023100--Sobic003G270600 Sobic008G085700 Sobic008G085700 Sobic001G023100--Sobic008G085700 Sobic001G460500--Sobic005G163700 Sobic002G423500 Sobic002G423500 Sobic001G460500--Sobic002G423500 Sobic001G460500--Sobic002G014400 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic004G047200 Sobic004G047200 Sobic001G460500--Sobic004G047200 Sobic002G412700 Sobic002G412700 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic002G070600 Sobic002G070600 Sobic001G161700--Sobic002G070600 Sobic001G161700--Sobic008G072200 Sobic001G490500 Sobic001G490500 Sobic001G161700--Sobic001G490500 Sobic001G012900 Sobic001G012900 Sobic001G161700--Sobic001G012900 Sobic001G161700--Sobic001G023100 Sobic001G161700--Sobic003G346400 Sobic004G000100 Sobic004G000100 Sobic001G161700--Sobic004G000100 Sobic004G254800 Sobic004G254800 Sobic001G161700--Sobic004G254800 Sobic001G161700--Sobic008G085700
Octagon: transcription factors


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