Gene annotation
Transcriptome id Sobic.010G255800.2
Synonym Sb10g029310
Functional annotation expressed protein
UniProt A0A1W0VUV2
Pfam PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF705
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G23450 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os06g49185.1 : expressed protein
MaizeGDB (Corn) Zm00025a041765
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1
2 Sobic.004G018300 expressed protein K06970: 23S rRNA (adenine1618-N6)-methyltransferase
3 Sobic.010G174700 expressed protein -
4 Sobic.002G164800 SET domain containing protein, expressed K11423: [histone H3]-dimethyl-L-lysine36 N-methyltransferase
5 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
6 Sobic.002G309200 FAR1 family protein, expressed -
7 Sobic.004G085000 expressed protein K14310: NUP205, nuclear pore complex protein Nup205
8 Sobic.007G029200 myosin heavy chain-related, putative, expressed -
9 Sobic.002G317200 uncharacterized ACR, COG1590 family protein, expressed K15450: tRNA wybutosine-synthesizing protein 3
10 Sobic.001G219900 expressed protein -
11 Sobic.004G176000 "SDG725(Ortholog in rice:Sui et al., 2012)"(PubMedID : 31659884)@histone-lysine N-methyltransferase ASHH2, putative, expressed -
12 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
13 Sobic.006G231800 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
14 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
15 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
16 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
17 Sobic.002G043100 histone deacetylase, putative, expressed K11407: histone deacetylase 6
18 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
19 Sobic.003G052800 RST1, putative, expressed -
20 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31


Gene co-expression network
sample Sobic010G255800 Sobic010G255800 Sobic006G185200 Sobic006G185200 Sobic010G255800--Sobic006G185200 Sobic004G018300 Sobic004G018300 Sobic010G255800--Sobic004G018300 Sobic010G174700 Sobic010G174700 Sobic010G255800--Sobic010G174700 Sobic002G164800 Sobic002G164800 Sobic010G255800--Sobic002G164800 Sobic004G223600 Sobic004G223600 Sobic010G255800--Sobic004G223600 Sobic002G309200 Sobic002G309200 Sobic010G255800--Sobic002G309200 Sobic004G085000 Sobic004G085000 Sobic010G255800--Sobic004G085000 Sobic007G029200 Sobic007G029200 Sobic010G255800--Sobic007G029200 Sobic002G317200 Sobic002G317200 Sobic010G255800--Sobic002G317200 Sobic002G378100 Sobic002G378100 Sobic006G185200--Sobic002G378100 Sobic006G185200--Sobic004G085000 Sobic008G017100 Sobic008G017100 Sobic006G185200--Sobic008G017100 Sobic001G214600 Sobic001G214600 Sobic006G185200--Sobic001G214600 Sobic009G213200 Sobic009G213200 Sobic006G185200--Sobic009G213200 Sobic010G147833 Sobic010G147833 Sobic006G185200--Sobic010G147833 Sobic006G185200--Sobic004G223600 Sobic004G260100 Sobic004G260100 Sobic006G185200--Sobic004G260100 Sobic001G145400 Sobic001G145400 Sobic006G185200--Sobic001G145400 Sobic004G087600 Sobic004G087600 Sobic004G018300--Sobic004G087600 Sobic001G167200 Sobic001G167200 Sobic004G018300--Sobic001G167200 Sobic008G011100 Sobic008G011100 Sobic004G018300--Sobic008G011100 Sobic002G158700 Sobic002G158700 Sobic004G018300--Sobic002G158700 Sobic002G396000 Sobic002G396000 Sobic004G018300--Sobic002G396000 Sobic001G081000 Sobic001G081000 Sobic004G018300--Sobic001G081000 Sobic008G083000 Sobic008G083000 Sobic004G018300--Sobic008G083000 Sobic009G126400 Sobic009G126400 Sobic004G018300--Sobic009G126400 Sobic004G018300--Sobic004G223600 Sobic006G036100 Sobic006G036100 Sobic010G174700--Sobic006G036100 Sobic001G352900 Sobic001G352900 Sobic010G174700--Sobic001G352900 Sobic001G089600 Sobic001G089600 Sobic010G174700--Sobic001G089600 Sobic001G052400 Sobic001G052400 Sobic010G174700--Sobic001G052400 Sobic002G145800 Sobic002G145800 Sobic010G174700--Sobic002G145800 Sobic001G451300 Sobic001G451300 Sobic010G174700--Sobic001G451300 Sobic010G053600 Sobic010G053600 Sobic010G174700--Sobic010G053600 Sobic001G453400 Sobic001G453400 Sobic010G174700--Sobic001G453400 Sobic005G220000 Sobic005G220000 Sobic010G174700--Sobic005G220000 Sobic001G219900 Sobic001G219900 Sobic002G164800--Sobic001G219900 Sobic002G164800--Sobic001G352900 Sobic002G164800--Sobic004G018300 Sobic007G031600 Sobic007G031600 Sobic002G164800--Sobic007G031600 Sobic008G131000 Sobic008G131000 Sobic002G164800--Sobic008G131000 Sobic002G164800--Sobic008G083000 Sobic009G047200 Sobic009G047200 Sobic002G164800--Sobic009G047200 Sobic002G164800--Sobic002G396000 Sobic009G260500 Sobic009G260500 Sobic002G164800--Sobic009G260500 Sobic004G223600--Sobic001G219900 Sobic004G223600--Sobic001G214600 Sobic004G223600--Sobic002G317200 Sobic003G307000 Sobic003G307000 Sobic004G223600--Sobic003G307000 Sobic007G042400 Sobic007G042400 Sobic004G223600--Sobic007G042400 Sobic009G247400 Sobic009G247400 Sobic004G223600--Sobic009G247400 Sobic001G311500 Sobic001G311500 Sobic004G223600--Sobic001G311500 Sobic002G071500 Sobic002G071500 Sobic004G223600--Sobic002G071500 Sobic003G152400 Sobic003G152400 Sobic004G223600--Sobic003G152400 Sobic004G155600 Sobic004G155600 Sobic002G309200--Sobic004G155600 Sobic005G191900 Sobic005G191900 Sobic002G309200--Sobic005G191900 Sobic002G309200--Sobic008G011100 Sobic007G071200 Sobic007G071200 Sobic002G309200--Sobic007G071200 Sobic001G540800 Sobic001G540800 Sobic002G309200--Sobic001G540800 Sobic004G096500 Sobic004G096500 Sobic002G309200--Sobic004G096500 Sobic002G309200--Sobic002G145800 Sobic003G133900 Sobic003G133900 Sobic002G309200--Sobic003G133900 Sobic007G011600 Sobic007G011600 Sobic002G309200--Sobic007G011600 Sobic004G085000--Sobic001G145400 Sobic010G114900 Sobic010G114900 Sobic004G085000--Sobic010G114900 Sobic004G085000--Sobic006G185200 Sobic003G199300 Sobic003G199300 Sobic004G085000--Sobic003G199300 Sobic005G010900 Sobic005G010900 Sobic004G085000--Sobic005G010900 Sobic004G085000--Sobic001G219900 Sobic002G430300 Sobic002G430300 Sobic004G085000--Sobic002G430300 Sobic009G101200 Sobic009G101200 Sobic004G085000--Sobic009G101200 Sobic006G086600 Sobic006G086600 Sobic004G085000--Sobic006G086600 Sobic007G029200--Sobic005G191900 Sobic009G142000 Sobic009G142000 Sobic007G029200--Sobic009G142000 Sobic006G215050 Sobic006G215050 Sobic007G029200--Sobic006G215050 Sobic007G029200--Sobic001G167200 Sobic007G029200--Sobic004G085000 Sobic008G002500 Sobic008G002500 Sobic007G029200--Sobic008G002500 Sobic001G134300 Sobic001G134300 Sobic007G029200--Sobic001G134300 Sobic007G029200--Sobic002G317200 Sobic007G029200--Sobic001G352900 Sobic004G048800 Sobic004G048800 Sobic002G317200--Sobic004G048800 Sobic001G219600 Sobic001G219600 Sobic002G317200--Sobic001G219600 Sobic004G314000 Sobic004G314000 Sobic002G317200--Sobic004G314000 Sobic001G433800 Sobic001G433800 Sobic002G317200--Sobic001G433800 Sobic003G095900 Sobic003G095900 Sobic002G317200--Sobic003G095900 Sobic004G242400 Sobic004G242400 Sobic002G317200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic002G317200--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic002G317200--Sobic005G112300 Sobic002G317200--Sobic009G260500
Octagon: transcription factors


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