Gene annotation
Transcriptome id Sobic.001G031400.1
Synonym GIP1, ATGIP1, Sb01g002940
Functional annotation expressed protein
UniProt C5WUY5
Pfam PF12554
Panther DB PTHR28520 PTHR28520:SF1
NCBI CDD -
KEGG Orthology K18633; MZT1, GIP1, mitotic-spindle organizing protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09550 : AtGCP3 interacting protein 1
RAP-DB (Rice) LOC_Os03g60900.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK12394
Barley HORVU5Hr1G114640.6 , HORVU5Hr1G114640.5 , HORVU5Hr1G114640.4 , HORVU5Hr1G114640.3 , HORVU5Hr1G114640.2 , HORVU5Hr1G114640.1 , HORVU5Hr1G114660.1 , HORVU5Hr1G114660.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G336050 - K18635: protein SPIRAL1 and related proteins
2 Sobic.006G251701 - -
3 Sobic.007G184001 - K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
4 Sobic.003G289601 - -
5 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
6 Sobic.007G022500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
7 Sobic.009G224600 SNARE domain containing protein, putative, expressed K08506: syntaxin of plants SYP7
8 Sobic.002G376500 OsCML8 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.010G042800 peptidase, T1 family, putative, expressed K02737: 20S proteasome subunit beta 5
10 Sobic.004G310900 emp24/gp25L/p24 family protein, putative, expressed -
11 Sobic.001G448200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
12 Sobic.003G044700 zinc finger family protein, putative, expressed -
13 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
14 Sobic.001G517600 ribosomal L18p/L5e family protein, putative, expressed K02932: RP-L5e, large subunit ribosomal protein L5e
15 Sobic.004G264700 ATP synthase F1, delta subunit family protein, putative, expressed K02137: ATPeF0O, ATP5O, F-type H+-transporting ATPase subunit O
16 Sobic.004G133500 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.001G034600 zinc knuckle domain containing protein, expressed K09250: cellular nucleic acid-binding protein
18 Sobic.009G169200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
19 Sobic.002G079900 tryptophan/tyrosine permease family protein, putative, expressed -
20 Sobic.004G064900 gp176, putative, expressed -


Gene co-expression network
sample Sobic001G031400 Sobic001G031400 Sobic001G336050 Sobic001G336050 Sobic001G031400--Sobic001G336050 Sobic006G251701 Sobic006G251701 Sobic001G031400--Sobic006G251701 Sobic007G184001 Sobic007G184001 Sobic001G031400--Sobic007G184001 Sobic003G289601 Sobic003G289601 Sobic001G031400--Sobic003G289601 Sobic006G099800 Sobic006G099800 Sobic001G031400--Sobic006G099800 Sobic007G022500 Sobic007G022500 Sobic001G031400--Sobic007G022500 Sobic009G224600 Sobic009G224600 Sobic001G031400--Sobic009G224600 Sobic002G376500 Sobic002G376500 Sobic001G031400--Sobic002G376500 Sobic010G042800 Sobic010G042800 Sobic001G031400--Sobic010G042800 Sobic001G154400 Sobic001G154400 Sobic001G336050--Sobic001G154400 Sobic001G517600 Sobic001G517600 Sobic001G336050--Sobic001G517600 Sobic006G108600 Sobic006G108600 Sobic001G336050--Sobic006G108600 Sobic004G032000 Sobic004G032000 Sobic001G336050--Sobic004G032000 Sobic001G336050--Sobic003G289601 Sobic002G304400 Sobic002G304400 Sobic001G336050--Sobic002G304400 Sobic007G134800 Sobic007G134800 Sobic001G336050--Sobic007G134800 Sobic003G072900 Sobic003G072900 Sobic001G336050--Sobic003G072900 Sobic003G300900 Sobic003G300900 Sobic001G336050--Sobic003G300900 Sobic001G309500 Sobic001G309500 Sobic006G251701--Sobic001G309500 Sobic002G090700 Sobic002G090700 Sobic006G251701--Sobic002G090700 Sobic004G159000 Sobic004G159000 Sobic006G251701--Sobic004G159000 Sobic003G405900 Sobic003G405900 Sobic006G251701--Sobic003G405900 Sobic004G286100 Sobic004G286100 Sobic006G251701--Sobic004G286100 Sobic002G368400 Sobic002G368400 Sobic006G251701--Sobic002G368400 Sobic006G251701--Sobic010G042800 Sobic008G175100 Sobic008G175100 Sobic006G251701--Sobic008G175100 Sobic006G220700 Sobic006G220700 Sobic006G251701--Sobic006G220700 Sobic007G184001--Sobic003G289601 Sobic001G031800 Sobic001G031800 Sobic007G184001--Sobic001G031800 Sobic002G329900 Sobic002G329900 Sobic007G184001--Sobic002G329900 Sobic009G209001 Sobic009G209001 Sobic007G184001--Sobic009G209001 Sobic001G047800 Sobic001G047800 Sobic007G184001--Sobic001G047800 Sobic002G263100 Sobic002G263100 Sobic007G184001--Sobic002G263100 Sobic004G260200 Sobic004G260200 Sobic007G184001--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic007G184001--Sobic002G309700 Sobic003G296800 Sobic003G296800 Sobic007G184001--Sobic003G296800 Sobic006G261900 Sobic006G261900 Sobic003G289601--Sobic006G261900 Sobic003G289601--Sobic007G184001 Sobic003G289601--Sobic001G047800 Sobic006G262300 Sobic006G262300 Sobic003G289601--Sobic006G262300 Sobic003G289601--Sobic003G296800 Sobic009G173500 Sobic009G173500 Sobic003G289601--Sobic009G173500 Sobic003G289601--Sobic002G329900 Sobic009G223300 Sobic009G223300 Sobic003G289601--Sobic009G223300 Sobic003G289601--Sobic002G309700 Sobic002G276900 Sobic002G276900 Sobic006G099800--Sobic002G276900 Sobic007G038800 Sobic007G038800 Sobic006G099800--Sobic007G038800 Sobic001G148700 Sobic001G148700 Sobic006G099800--Sobic001G148700 Sobic003G227200 Sobic003G227200 Sobic006G099800--Sobic003G227200 Sobic003G434000 Sobic003G434000 Sobic006G099800--Sobic003G434000 Sobic007G192100 Sobic007G192100 Sobic006G099800--Sobic007G192100 Sobic008G108500 Sobic008G108500 Sobic006G099800--Sobic008G108500 Sobic003G031200 Sobic003G031200 Sobic006G099800--Sobic003G031200 Sobic004G028800 Sobic004G028800 Sobic006G099800--Sobic004G028800 Sobic008G094600 Sobic008G094600 Sobic007G022500--Sobic008G094600 Sobic007G022500--Sobic004G032000 Sobic007G022500--Sobic001G517600 Sobic009G191200 Sobic009G191200 Sobic007G022500--Sobic009G191200 Sobic008G098800 Sobic008G098800 Sobic007G022500--Sobic008G098800 Sobic002G044000 Sobic002G044000 Sobic007G022500--Sobic002G044000 Sobic007G022500--Sobic006G108600 Sobic004G137900 Sobic004G137900 Sobic007G022500--Sobic004G137900 Sobic003G358300 Sobic003G358300 Sobic007G022500--Sobic003G358300 Sobic010G144900 Sobic010G144900 Sobic009G224600--Sobic010G144900 Sobic003G084300 Sobic003G084300 Sobic009G224600--Sobic003G084300 Sobic010G217100 Sobic010G217100 Sobic009G224600--Sobic010G217100 Sobic009G189200 Sobic009G189200 Sobic009G224600--Sobic009G189200 Sobic001G412500 Sobic001G412500 Sobic009G224600--Sobic001G412500 Sobic009G124200 Sobic009G124200 Sobic009G224600--Sobic009G124200 Sobic006G094100 Sobic006G094100 Sobic009G224600--Sobic006G094100 Sobic009G165500 Sobic009G165500 Sobic009G224600--Sobic009G165500 Sobic001G418000 Sobic001G418000 Sobic009G224600--Sobic001G418000 Sobic003G362400 Sobic003G362400 Sobic002G376500--Sobic003G362400 Sobic002G376500--Sobic010G042800 Sobic001G529000 Sobic001G529000 Sobic002G376500--Sobic001G529000 Sobic010G210000 Sobic010G210000 Sobic002G376500--Sobic010G210000 Sobic002G376500--Sobic001G309500 Sobic006G141500 Sobic006G141500 Sobic002G376500--Sobic006G141500 Sobic002G218000 Sobic002G218000 Sobic002G376500--Sobic002G218000 Sobic002G159500 Sobic002G159500 Sobic002G376500--Sobic002G159500 Sobic010G153100 Sobic010G153100 Sobic002G376500--Sobic010G153100 Sobic004G310900 Sobic004G310900 Sobic010G042800--Sobic004G310900 Sobic002G263800 Sobic002G263800 Sobic010G042800--Sobic002G263800 Sobic005G157200 Sobic005G157200 Sobic010G042800--Sobic005G157200 Sobic002G406500 Sobic002G406500 Sobic010G042800--Sobic002G406500 Sobic004G066800 Sobic004G066800 Sobic010G042800--Sobic004G066800 Sobic010G042800--Sobic004G032000 Sobic001G331900 Sobic001G331900 Sobic010G042800--Sobic001G331900 Sobic003G129800 Sobic003G129800 Sobic010G042800--Sobic003G129800 Sobic001G128400 Sobic001G128400 Sobic010G042800--Sobic001G128400
Octagon: transcription factors


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