Gene annotation
Transcriptome id Sobic.001G263200.1
Synonym Sb01g025090
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt A0A1B6QL61
Pfam PF00561
Panther DB PTHR15913 PTHR15913:SF0
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12230 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os10g08840.2 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003864
Brachypodium KQJ96351
Barley HORVU1Hr1G031310.13 , HORVU1Hr1G031310.12 , HORVU1Hr1G031310.11 , HORVU1Hr1G031310.10 , HORVU1Hr1G031310.7 , HORVU1Hr1G031310.6 , HORVU1Hr1G031310.5 , HORVU1Hr1G031310.4 , HORVU1Hr1G031310.3 , HORVU1Hr1G031310.2 , HORVU1Hr1G031310.1 , HORVU1Hr1G031310.8
Wheat TraesCS1D02G136300 , TraesCS1D02G136300 , TraesCS1D02G136300 , TraesCS1D02G136300 , TraesCS1A02G139100
Populus -


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cDNA sequences
Sobic.001G263200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G412300 expressed protein -
2 Sobic.001G509500 glutamyl-tRNA synthetase, cytoplasmic, putative, expressed K01885: EARS, glutamyl-tRNA synthetase
3 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
4 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
5 Sobic.009G151200 expressed protein -
6 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
7 Sobic.003G289400 farnesyltransferase subunit beta, putative, expressed K05954: protein farnesyltransferase subunit beta
8 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
9 Sobic.007G027700 expressed protein -
10 Sobic.010G279900 PHD-finger domain containing protein, expressed -
11 Sobic.010G219000 tRNA pseudouridine synthase family protein, putative, expressed -
12 Sobic.002G058400 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
13 Sobic.006G067600 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
14 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
15 Sobic.002G300700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.001G222000 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.006G200700 elongation factor Tu, putative, expressed K14416: elongation factor 1 alpha-like protein
18 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
19 Sobic.006G211500 "GA biosynthetic gene, causes dwarfism accompanied by unusual culm bending in the mutants"(PubMedID : 24924234)@ent-kaurene synthase, chloroplast precursor, putative, expressed K04121: ent-kaurene synthase
20 Sobic.001G405300 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed -


Gene co-expression network
sample Sobic001G263200 Sobic001G263200 Sobic003G412300 Sobic003G412300 Sobic001G263200--Sobic003G412300 Sobic001G509500 Sobic001G509500 Sobic001G263200--Sobic001G509500 Sobic005G216300 Sobic005G216300 Sobic001G263200--Sobic005G216300 Sobic001G142100 Sobic001G142100 Sobic001G263200--Sobic001G142100 Sobic009G151200 Sobic009G151200 Sobic001G263200--Sobic009G151200 Sobic007G119200 Sobic007G119200 Sobic001G263200--Sobic007G119200 Sobic003G289400 Sobic003G289400 Sobic001G263200--Sobic003G289400 Sobic010G065300 Sobic010G065300 Sobic001G263200--Sobic010G065300 Sobic007G027700 Sobic007G027700 Sobic001G263200--Sobic007G027700 Sobic003G412300--Sobic007G027700 Sobic003G401100 Sobic003G401100 Sobic003G412300--Sobic003G401100 Sobic004G156500 Sobic004G156500 Sobic003G412300--Sobic004G156500 Sobic001G138400 Sobic001G138400 Sobic003G412300--Sobic001G138400 Sobic006G252700 Sobic006G252700 Sobic003G412300--Sobic006G252700 Sobic002G058300 Sobic002G058300 Sobic003G412300--Sobic002G058300 Sobic007G054400 Sobic007G054400 Sobic003G412300--Sobic007G054400 Sobic002G259800 Sobic002G259800 Sobic003G412300--Sobic002G259800 Sobic002G357100 Sobic002G357100 Sobic003G412300--Sobic002G357100 Sobic003G004300 Sobic003G004300 Sobic001G509500--Sobic003G004300 Sobic008G098300 Sobic008G098300 Sobic001G509500--Sobic008G098300 Sobic006G182200 Sobic006G182200 Sobic001G509500--Sobic006G182200 Sobic003G188500 Sobic003G188500 Sobic001G509500--Sobic003G188500 Sobic001G008200 Sobic001G008200 Sobic001G509500--Sobic001G008200 Sobic004G264400 Sobic004G264400 Sobic001G509500--Sobic004G264400 Sobic009G056200 Sobic009G056200 Sobic001G509500--Sobic009G056200 Sobic004G048800 Sobic004G048800 Sobic001G509500--Sobic004G048800 Sobic006G200700 Sobic006G200700 Sobic001G509500--Sobic006G200700 Sobic003G099300 Sobic003G099300 Sobic005G216300--Sobic003G099300 Sobic005G216300--Sobic007G027700 Sobic004G039600 Sobic004G039600 Sobic005G216300--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic005G216300--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic005G216300--Sobic001G335900 Sobic001G426600 Sobic001G426600 Sobic005G216300--Sobic001G426600 Sobic005G216300--Sobic001G142100 Sobic003G126600 Sobic003G126600 Sobic005G216300--Sobic003G126600 Sobic006G208500 Sobic006G208500 Sobic005G216300--Sobic006G208500 Sobic005G004200 Sobic005G004200 Sobic001G142100--Sobic005G004200 Sobic008G131000 Sobic008G131000 Sobic001G142100--Sobic008G131000 Sobic003G187500 Sobic003G187500 Sobic001G142100--Sobic003G187500 Sobic001G142100--Sobic005G216300 Sobic001G142100--Sobic003G401100 Sobic001G142100--Sobic006G252700 Sobic003G439800 Sobic003G439800 Sobic001G142100--Sobic003G439800 Sobic006G114500 Sobic006G114500 Sobic001G142100--Sobic006G114500 Sobic003G114700 Sobic003G114700 Sobic001G142100--Sobic003G114700 Sobic006G248500 Sobic006G248500 Sobic009G151200--Sobic006G248500 Sobic009G151200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic009G151200--Sobic005G133500 Sobic004G285000 Sobic004G285000 Sobic009G151200--Sobic004G285000 Sobic001G424600 Sobic001G424600 Sobic009G151200--Sobic001G424600 Sobic004G085300 Sobic004G085300 Sobic009G151200--Sobic004G085300 Sobic008G100100 Sobic008G100100 Sobic009G151200--Sobic008G100100 Sobic004G086200 Sobic004G086200 Sobic009G151200--Sobic004G086200 Sobic009G151200--Sobic004G156500 Sobic002G034600 Sobic002G034600 Sobic007G119200--Sobic002G034600 Sobic004G146500 Sobic004G146500 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic001G109800 Sobic001G109800 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic010G069100 Sobic010G069100 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic002G264200 Sobic002G264200 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic006G173100 Sobic006G173100 Sobic003G289400--Sobic006G173100 Sobic007G118200 Sobic007G118200 Sobic003G289400--Sobic007G118200 Sobic001G091400 Sobic001G091400 Sobic003G289400--Sobic001G091400 Sobic010G245000 Sobic010G245000 Sobic003G289400--Sobic010G245000 Sobic001G090400 Sobic001G090400 Sobic003G289400--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic003G289400--Sobic003G081000 Sobic006G195700 Sobic006G195700 Sobic003G289400--Sobic006G195700 Sobic008G014500 Sobic008G014500 Sobic003G289400--Sobic008G014500 Sobic001G408700 Sobic001G408700 Sobic003G289400--Sobic001G408700 Sobic010G001100 Sobic010G001100 Sobic010G065300--Sobic010G001100 Sobic008G009700 Sobic008G009700 Sobic010G065300--Sobic008G009700 Sobic002G153700 Sobic002G153700 Sobic010G065300--Sobic002G153700 Sobic001G306900 Sobic001G306900 Sobic010G065300--Sobic001G306900 Sobic001G134300 Sobic001G134300 Sobic010G065300--Sobic001G134300 Sobic003G293200 Sobic003G293200 Sobic010G065300--Sobic003G293200 Sobic009G119000 Sobic009G119000 Sobic010G065300--Sobic009G119000 Sobic010G065300--Sobic004G156500 Sobic010G065300--Sobic004G048800 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic007G027700--Sobic003G401100 Sobic007G027700--Sobic003G412300 Sobic001G143500 Sobic001G143500 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300
Octagon: transcription factors


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