Gene annotation
Transcriptome id Sobic.001G412800.2,Sobic.001G412800.1
Synonym GSTL2, Sb01g038910
Functional annotation IN2-1 protein, putative, expressed
UniProt A0A1B6QNZ1 , A0A1B6QNZ7
Pfam PF13410 PF13417
Panther DB PTHR11260 PTHR11260:SF261
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G02790 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os03g17470.1 : IN2-1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a052715 , Zm00025a001910
Brachypodium -
Barley HORVU4Hr1G057890.10 , HORVU4Hr1G057890.12 , HORVU4Hr1G057910.8 , HORVU4Hr1G057910.9 , HORVU4Hr1G057910.4 , HORVU4Hr1G057910.5 , HORVU4Hr1G057910.6 , HORVU4Hr1G057910.1 , HORVU4Hr1G057910.2 , HORVU4Hr1G057910.3 , HORVU4Hr1G057910.7 , HORVU4Hr1G057910.12 , HORVU4Hr1G057910.10 , HORVU4Hr1G057910.11 , HORVU4Hr1G057890.5 , HORVU4Hr1G057890.4 , HORVU4Hr1G057890.7 , HORVU4Hr1G057890.6 , HORVU4Hr1G057890.3 , HORVU4Hr1G057890.2 , HORVU4Hr1G057890.9 , HORVU4Hr1G057890.8 , HORVU4Hr1G057740.1 , HORVU4Hr1G057740.3 , HORVU4Hr1G057740.2 , HORVU4Hr1G057740.4
Wheat TraesCS4B02G200000 , TraesCS4D02G201200 , TraesCS4D02G201200 , TraesCS4D02G201200 , TraesCS4A02G103800 , TraesCS4A02G104300 , TraesCS4B02G200100 , TraesCS4B02G200100 , TraesCS4D02G201100 , TraesCS4D02G201100 , TraesCS4A02G103900 , TraesCS4A02G103900 , TraesCS4A02G103900
Populus -


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cDNA sequences
Sobic.001G412800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
2 Sobic.003G425300 Phycoerythrobilin ferredoxin oxidoreductase(PubMedID : 24906815)@phycoerythrobilin ferredoxin oxidoreductase, putative, expressed K08101: phytochromobilin:ferredoxin oxidoreductase
3 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
4 Sobic.005G062700 nifU, putative, expressed -
5 Sobic.008G187100 early-responsive to dehydration protein-related, putative, expressed -
6 Sobic.001G292000 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.003G381700 DUF647 domain containing protein, putative, expressed -
8 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
9 Sobic.005G004500 ferritin-1, chloroplast precursor, putative, expressed K00522: ferritin heavy chain
10 Sobic.009G241100 expressed protein -
11 Sobic.002G072400 zeta-carotene desaturase, chloroplast/chromoplast precursor, putative, expressed K00514: ZDS, zeta-carotene desaturase
12 Sobic.002G159100 chlorophyll A-B binding protein, putative, expressed K14172: light-harvesting complex II chlorophyll a/b binding protein 7
13 Sobic.001G352200 heavy metal-associated domain containing protein, expressed -
14 Sobic.009G129800 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
15 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
16 Sobic.004G305900 heat shock protein DnaJ, putative, expressed -
17 Sobic.002G204200 ubiquitin family protein, putative, expressed K12158: ubiquitin-like protein Nedd8
18 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
19 Sobic.001G160800 integral membrane protein DUF6 containing protein, expressed -
20 Sobic.004G269800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase


Gene co-expression network
sample Sobic001G412800 Sobic001G412800 Sobic003G373600 Sobic003G373600 Sobic001G412800--Sobic003G373600 Sobic003G425300 Sobic003G425300 Sobic001G412800--Sobic003G425300 Sobic009G162600 Sobic009G162600 Sobic001G412800--Sobic009G162600 Sobic005G062700 Sobic005G062700 Sobic001G412800--Sobic005G062700 Sobic008G187100 Sobic008G187100 Sobic001G412800--Sobic008G187100 Sobic001G292000 Sobic001G292000 Sobic001G412800--Sobic001G292000 Sobic003G381700 Sobic003G381700 Sobic001G412800--Sobic003G381700 Sobic008G089900 Sobic008G089900 Sobic001G412800--Sobic008G089900 Sobic005G004500 Sobic005G004500 Sobic001G412800--Sobic005G004500 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic003G373600--Sobic005G062700 Sobic003G373600--Sobic003G425300 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic007G079400 Sobic007G079400 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic003G373600--Sobic008G187100 Sobic004G323400 Sobic004G323400 Sobic003G425300--Sobic004G323400 Sobic002G417300 Sobic002G417300 Sobic003G425300--Sobic002G417300 Sobic002G295100 Sobic002G295100 Sobic003G425300--Sobic002G295100 Sobic003G425300--Sobic003G373600 Sobic005G132000 Sobic005G132000 Sobic003G425300--Sobic005G132000 Sobic003G277400 Sobic003G277400 Sobic003G425300--Sobic003G277400 Sobic003G426900 Sobic003G426900 Sobic003G425300--Sobic003G426900 Sobic003G428600 Sobic003G428600 Sobic003G425300--Sobic003G428600 Sobic003G440300 Sobic003G440300 Sobic003G425300--Sobic003G440300 Sobic003G340600 Sobic003G340600 Sobic009G162600--Sobic003G340600 Sobic002G349100 Sobic002G349100 Sobic009G162600--Sobic002G349100 Sobic009G103000 Sobic009G103000 Sobic009G162600--Sobic009G103000 Sobic002G072400 Sobic002G072400 Sobic009G162600--Sobic002G072400 Sobic002G275100 Sobic002G275100 Sobic009G162600--Sobic002G275100 Sobic003G105900 Sobic003G105900 Sobic009G162600--Sobic003G105900 Sobic009G162600--Sobic008G089900 Sobic004G300100 Sobic004G300100 Sobic009G162600--Sobic004G300100 Sobic003G029500 Sobic003G029500 Sobic009G162600--Sobic003G029500 Sobic009G225600 Sobic009G225600 Sobic005G062700--Sobic009G225600 Sobic001G015200 Sobic001G015200 Sobic005G062700--Sobic001G015200 Sobic002G047400 Sobic002G047400 Sobic005G062700--Sobic002G047400 Sobic001G303200 Sobic001G303200 Sobic005G062700--Sobic001G303200 Sobic006G221000 Sobic006G221000 Sobic005G062700--Sobic006G221000 Sobic001G509200 Sobic001G509200 Sobic005G062700--Sobic001G509200 Sobic005G062700--Sobic005G172400 Sobic007G108900 Sobic007G108900 Sobic005G062700--Sobic007G108900 Sobic004G305900 Sobic004G305900 Sobic005G062700--Sobic004G305900 Sobic008G187100--Sobic003G381700 Sobic003G186900 Sobic003G186900 Sobic008G187100--Sobic003G186900 Sobic003G339700 Sobic003G339700 Sobic008G187100--Sobic003G339700 Sobic005G106600 Sobic005G106600 Sobic008G187100--Sobic005G106600 Sobic001G057700 Sobic001G057700 Sobic008G187100--Sobic001G057700 Sobic001G352400 Sobic001G352400 Sobic008G187100--Sobic001G352400 Sobic003G166200 Sobic003G166200 Sobic008G187100--Sobic003G166200 Sobic004G322700 Sobic004G322700 Sobic008G187100--Sobic004G322700 Sobic007G146400 Sobic007G146400 Sobic008G187100--Sobic007G146400 Sobic003G313900 Sobic003G313900 Sobic001G292000--Sobic003G313900 Sobic009G190600 Sobic009G190600 Sobic001G292000--Sobic009G190600 Sobic001G292000--Sobic005G062700 Sobic003G437800 Sobic003G437800 Sobic001G292000--Sobic003G437800 Sobic003G051000 Sobic003G051000 Sobic001G292000--Sobic003G051000 Sobic001G292000--Sobic003G425300 Sobic001G292000--Sobic008G089900 Sobic001G104900 Sobic001G104900 Sobic001G292000--Sobic001G104900 Sobic009G129800 Sobic009G129800 Sobic001G292000--Sobic009G129800 Sobic003G381700--Sobic008G187100 Sobic003G381700--Sobic001G057700 Sobic003G381700--Sobic003G339700 Sobic003G264800 Sobic003G264800 Sobic003G381700--Sobic003G264800 Sobic003G381700--Sobic003G373600 Sobic003G381700--Sobic007G146400 Sobic003G381700--Sobic001G276300 Sobic001G333500 Sobic001G333500 Sobic003G381700--Sobic001G333500 Sobic003G381700--Sobic005G106600 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic008G089900--Sobic009G162600 Sobic004G103000 Sobic004G103000 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic002G001000 Sobic002G001000 Sobic008G089900--Sobic002G001000 Sobic001G414500 Sobic001G414500 Sobic008G089900--Sobic001G414500 Sobic001G243200 Sobic001G243200 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic009G207300 Sobic009G207300 Sobic008G089900--Sobic009G207300 Sobic002G200900 Sobic002G200900 Sobic005G004500--Sobic002G200900 Sobic006G108200 Sobic006G108200 Sobic005G004500--Sobic006G108200 Sobic004G154800 Sobic004G154800 Sobic005G004500--Sobic004G154800 Sobic004G055000 Sobic004G055000 Sobic005G004500--Sobic004G055000 Sobic001G352200 Sobic001G352200 Sobic005G004500--Sobic001G352200 Sobic005G134100 Sobic005G134100 Sobic005G004500--Sobic005G134100 Sobic004G028300 Sobic004G028300 Sobic005G004500--Sobic004G028300 Sobic001G167900 Sobic001G167900 Sobic005G004500--Sobic001G167900 Sobic002G351600 Sobic002G351600 Sobic005G004500--Sobic002G351600
Octagon: transcription factors


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