Gene annotation
Transcriptome id Sobic.001G444600.1
Synonym Sb01g041780
Functional annotation -
UniProt C5WRN6
Pfam PF15306
Panther DB PTHR37173 PTHR37173:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0017053; transcription repressor complex GO:0007049cell cycle


Orthologs (automatic annotation)
TAIR AT2G32840 : proline-rich family protein
RAP-DB (Rice) LOC_Os03g13190.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a052960
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121400 surfeit locus protein, putative, expressed -
2 Sobic.006G221400 expressed protein -
3 Sobic.001G341500 transcription initiation factor IID, putative, expressed K03133: TAF9B, transcription initiation factor TFIID subunit 9B
4 Sobic.010G032400 mitotic checkpoint protein, putative, expressed K02180: cell cycle arrest protein BUB3
5 Sobic.007G177300 kinetochore protein, putative, expressed K11547: NDC80, HEC1, kinetochore protein NDC80
6 Sobic.003G395300 TBC domain containing protein, expressed -
7 Sobic.001G119900 - K12858: DDX23, ATP-dependent RNA helicase DDX23/PRP28
8 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
9 Sobic.001G239800 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
10 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
11 Sobic.007G180000 RNA recognition motif containing protein, putative, expressed -
12 Sobic.003G375200 mitotic checkpoint family protein, putative, expressed -
13 Sobic.009G239200 - -
14 Sobic.009G007700 expressed protein -
15 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
16 Sobic.001G459100 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
17 Sobic.001G536000 actin, putative, expressed K11340: ACTL6A, actin-like protein 6A
18 Sobic.001G207500 ZOS10-06 - C2H2 zinc finger protein, expressed K15685: E3 ubiquitin-protein ligase Hakai
19 Sobic.005G120700 ThiF family domain containing protein, putative, expressed K10684: UBLE1A, ubiquitin-like 1-activating enzyme E1 A
20 Sobic.002G160700 WD domain, G-beta repeat domain containing protein, expressed K12880: THO complex subunit 3


Gene co-expression network
sample Sobic001G444600 Sobic001G444600 Sobic006G121400 Sobic006G121400 Sobic001G444600--Sobic006G121400 Sobic006G221400 Sobic006G221400 Sobic001G444600--Sobic006G221400 Sobic001G341500 Sobic001G341500 Sobic001G444600--Sobic001G341500 Sobic010G032400 Sobic010G032400 Sobic001G444600--Sobic010G032400 Sobic007G177300 Sobic007G177300 Sobic001G444600--Sobic007G177300 Sobic003G395300 Sobic003G395300 Sobic001G444600--Sobic003G395300 Sobic001G119900 Sobic001G119900 Sobic001G444600--Sobic001G119900 Sobic006G272200 Sobic006G272200 Sobic001G444600--Sobic006G272200 Sobic001G239800 Sobic001G239800 Sobic001G444600--Sobic001G239800 Sobic006G121400--Sobic010G032400 Sobic006G121400--Sobic007G177300 Sobic002G371200 Sobic002G371200 Sobic006G121400--Sobic002G371200 Sobic006G121400--Sobic001G444600 Sobic004G211100 Sobic004G211100 Sobic006G121400--Sobic004G211100 Sobic006G121400--Sobic006G272200 Sobic004G212700 Sobic004G212700 Sobic006G121400--Sobic004G212700 Sobic001G376400 Sobic001G376400 Sobic006G121400--Sobic001G376400 Sobic003G275600 Sobic003G275600 Sobic006G121400--Sobic003G275600 Sobic006G221400--Sobic010G032400 Sobic008G125000 Sobic008G125000 Sobic006G221400--Sobic008G125000 Sobic006G221400--Sobic001G444600 Sobic008G017200 Sobic008G017200 Sobic006G221400--Sobic008G017200 Sobic003G158700 Sobic003G158700 Sobic006G221400--Sobic003G158700 Sobic007G180000 Sobic007G180000 Sobic006G221400--Sobic007G180000 Sobic001G132900 Sobic001G132900 Sobic006G221400--Sobic001G132900 Sobic004G047200 Sobic004G047200 Sobic006G221400--Sobic004G047200 Sobic010G269100 Sobic010G269100 Sobic006G221400--Sobic010G269100 Sobic007G167900 Sobic007G167900 Sobic001G341500--Sobic007G167900 Sobic001G207500 Sobic001G207500 Sobic001G341500--Sobic001G207500 Sobic003G374000 Sobic003G374000 Sobic001G341500--Sobic003G374000 Sobic009G192000 Sobic009G192000 Sobic001G341500--Sobic009G192000 Sobic006G049700 Sobic006G049700 Sobic001G341500--Sobic006G049700 Sobic001G206900 Sobic001G206900 Sobic001G341500--Sobic001G206900 Sobic009G149500 Sobic009G149500 Sobic001G341500--Sobic009G149500 Sobic004G092500 Sobic004G092500 Sobic001G341500--Sobic004G092500 Sobic003G127300 Sobic003G127300 Sobic001G341500--Sobic003G127300 Sobic010G032400--Sobic006G121400 Sobic004G198900 Sobic004G198900 Sobic010G032400--Sobic004G198900 Sobic010G032400--Sobic006G221400 Sobic003G113800 Sobic003G113800 Sobic010G032400--Sobic003G113800 Sobic010G032400--Sobic001G119900 Sobic010G032400--Sobic004G212700 Sobic006G233000 Sobic006G233000 Sobic010G032400--Sobic006G233000 Sobic001G234200 Sobic001G234200 Sobic010G032400--Sobic001G234200 Sobic004G079200 Sobic004G079200 Sobic010G032400--Sobic004G079200 Sobic008G129600 Sobic008G129600 Sobic007G177300--Sobic008G129600 Sobic001G467100 Sobic001G467100 Sobic007G177300--Sobic001G467100 Sobic009G231700 Sobic009G231700 Sobic007G177300--Sobic009G231700 Sobic001G382600 Sobic001G382600 Sobic007G177300--Sobic001G382600 Sobic010G020400 Sobic010G020400 Sobic007G177300--Sobic010G020400 Sobic002G394600 Sobic002G394600 Sobic007G177300--Sobic002G394600 Sobic009G077600 Sobic009G077600 Sobic007G177300--Sobic009G077600 Sobic002G014400 Sobic002G014400 Sobic007G177300--Sobic002G014400 Sobic008G103300 Sobic008G103300 Sobic007G177300--Sobic008G103300 Sobic003G395300--Sobic001G207500 Sobic003G395300--Sobic001G467100 Sobic006G039400 Sobic006G039400 Sobic003G395300--Sobic006G039400 Sobic001G358500 Sobic001G358500 Sobic003G395300--Sobic001G358500 Sobic003G395300--Sobic008G129600 Sobic002G160700 Sobic002G160700 Sobic003G395300--Sobic002G160700 Sobic002G131400 Sobic002G131400 Sobic003G395300--Sobic002G131400 Sobic010G179700 Sobic010G179700 Sobic003G395300--Sobic010G179700 Sobic003G182300 Sobic003G182300 Sobic003G395300--Sobic003G182300 Sobic003G122500 Sobic003G122500 Sobic001G119900--Sobic003G122500 Sobic010G228700 Sobic010G228700 Sobic001G119900--Sobic010G228700 Sobic004G235300 Sobic004G235300 Sobic001G119900--Sobic004G235300 Sobic008G051200 Sobic008G051200 Sobic001G119900--Sobic008G051200 Sobic002G083900 Sobic002G083900 Sobic001G119900--Sobic002G083900 Sobic009G155250 Sobic009G155250 Sobic001G119900--Sobic009G155250 Sobic010G085200 Sobic010G085200 Sobic001G119900--Sobic010G085200 Sobic001G251100 Sobic001G251100 Sobic001G119900--Sobic001G251100 Sobic002G052700 Sobic002G052700 Sobic001G119900--Sobic002G052700 Sobic006G272200--Sobic010G085200 Sobic003G119400 Sobic003G119400 Sobic006G272200--Sobic003G119400 Sobic001G362300 Sobic001G362300 Sobic006G272200--Sobic001G362300 Sobic002G394800 Sobic002G394800 Sobic006G272200--Sobic002G394800 Sobic009G007700 Sobic009G007700 Sobic006G272200--Sobic009G007700 Sobic004G074300 Sobic004G074300 Sobic006G272200--Sobic004G074300 Sobic001G370300 Sobic001G370300 Sobic006G272200--Sobic001G370300 Sobic006G272200--Sobic006G233000 Sobic008G009600 Sobic008G009600 Sobic006G272200--Sobic008G009600 Sobic006G112700 Sobic006G112700 Sobic001G239800--Sobic006G112700 Sobic003G123100 Sobic003G123100 Sobic001G239800--Sobic003G123100 Sobic002G318800 Sobic002G318800 Sobic001G239800--Sobic002G318800 Sobic003G330900 Sobic003G330900 Sobic001G239800--Sobic003G330900 Sobic001G536000 Sobic001G536000 Sobic001G239800--Sobic001G536000 Sobic002G252100 Sobic002G252100 Sobic001G239800--Sobic002G252100 Sobic007G014800 Sobic007G014800 Sobic001G239800--Sobic007G014800 Sobic006G125900 Sobic006G125900 Sobic001G239800--Sobic006G125900 Sobic004G315500 Sobic004G315500 Sobic001G239800--Sobic004G315500
Octagon: transcription factors


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