Gene annotation
Transcriptome id Sobic.001G498700.1,Sobic.001G498700.2
Synonym Sb01g046590
Functional annotation OsFBO11 - F-box and other domain containing protein, expressed
UniProt C5WXS9 , A0A1Z5SBA5
Pfam PF00646 PF08387 PF00646
Panther DB PTHR32212 PTHR32212:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G16930 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os02g29150.1,LOC_Os02g29150.2 : OsFBO11 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT66053 , KQK08597 , KQJ93716 , KQK15162 , KQK08602 , PNT66052 , KQK21695 , PNT72328 , PNT72329
Barley HORVU3Hr1G094100.1 , HORVU3Hr1G094100.3
Wheat TraesCS4B02G115300 , TraesCS2A02G555900 , TraesCS2B02G088600 , TraesCS4D02G117600 , TraesCS5B02G480000 , TraesCS2B02G548500 , TraesCS2A02G096100 , TraesCS5B02G479500 , TraesCS3B02G501600 , TraesCS2B02G111500 , TraesCS2D02G558100 , TraesCS2D02G558100 , TraesCS3B02G501400 , TraesCS5D02G480700 , TraesCS6B02G137400 , TraesCS6D02G097200 , TraesCS3D02G163600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
2 Sobic.001G060500 YT521-B, putative, expressed -
3 Sobic.002G073200 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
4 Sobic.003G203300 stress regulated protein, putative, expressed -
5 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
6 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
7 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
8 Sobic.003G125900 DNA gyrase subunit B, chloroplast/mitochondrial precursor, putative, expressed K02470: DNA gyrase subunit B
9 Sobic.006G233700 PolI-like DNA polymerase, putative, expressed K02335: DNA polymerase I
10 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
11 Sobic.001G540600 expressed protein -
12 Sobic.010G125500 zinc finger, C3HC4 type domain containing protein, expressed K10601: SYVN1, E3 ubiquitin-protein ligase synoviolin
13 Sobic.002G173100 Leucine Rich Repeat family protein, expressed -
14 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
15 Sobic.009G170200 translation initiation factor IF-2, chloroplast precursor, putative, expressed K02519: infB, translation initiation factor IF-2
16 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
17 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
18 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
19 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
20 Sobic.001G038601 - -


Gene co-expression network
sample Sobic001G498700 Sobic001G498700 Sobic004G179400 Sobic004G179400 Sobic001G498700--Sobic004G179400 Sobic001G060500 Sobic001G060500 Sobic001G498700--Sobic001G060500 Sobic002G073200 Sobic002G073200 Sobic001G498700--Sobic002G073200 Sobic003G203300 Sobic003G203300 Sobic001G498700--Sobic003G203300 Sobic006G186500 Sobic006G186500 Sobic001G498700--Sobic006G186500 Sobic007G058001 Sobic007G058001 Sobic001G498700--Sobic007G058001 Sobic002G028400 Sobic002G028400 Sobic001G498700--Sobic002G028400 Sobic003G125900 Sobic003G125900 Sobic001G498700--Sobic003G125900 Sobic006G233700 Sobic006G233700 Sobic001G498700--Sobic006G233700 Sobic001G540600 Sobic001G540600 Sobic004G179400--Sobic001G540600 Sobic004G179400--Sobic001G060500 Sobic009G207900 Sobic009G207900 Sobic004G179400--Sobic009G207900 Sobic004G179400--Sobic002G028400 Sobic008G074000 Sobic008G074000 Sobic004G179400--Sobic008G074000 Sobic004G179400--Sobic003G125900 Sobic001G378100 Sobic001G378100 Sobic004G179400--Sobic001G378100 Sobic009G170200 Sobic009G170200 Sobic004G179400--Sobic009G170200 Sobic001G504400 Sobic001G504400 Sobic004G179400--Sobic001G504400 Sobic001G060500--Sobic006G233700 Sobic001G060500--Sobic004G179400 Sobic001G060500--Sobic002G073200 Sobic003G190000 Sobic003G190000 Sobic001G060500--Sobic003G190000 Sobic001G060500--Sobic003G203300 Sobic002G173100 Sobic002G173100 Sobic001G060500--Sobic002G173100 Sobic010G110400 Sobic010G110400 Sobic001G060500--Sobic010G110400 Sobic001G060500--Sobic003G125900 Sobic003G108900 Sobic003G108900 Sobic001G060500--Sobic003G108900 Sobic009G014100 Sobic009G014100 Sobic002G073200--Sobic009G014100 Sobic002G073200--Sobic001G060500 Sobic002G073200--Sobic003G190000 Sobic002G418600 Sobic002G418600 Sobic002G073200--Sobic002G418600 Sobic002G073200--Sobic003G203300 Sobic002G073200--Sobic010G110400 Sobic002G073200--Sobic003G108900 Sobic001G500600 Sobic001G500600 Sobic002G073200--Sobic001G500600 Sobic002G073200--Sobic006G233700 Sobic006G232600 Sobic006G232600 Sobic003G203300--Sobic006G232600 Sobic003G203300--Sobic008G074000 Sobic003G203300--Sobic001G378100 Sobic009G093100 Sobic009G093100 Sobic003G203300--Sobic009G093100 Sobic003G203300--Sobic009G170200 Sobic003G203300--Sobic001G504400 Sobic002G081400 Sobic002G081400 Sobic003G203300--Sobic002G081400 Sobic003G203300--Sobic006G233700 Sobic004G207400 Sobic004G207400 Sobic003G203300--Sobic004G207400 Sobic009G143500 Sobic009G143500 Sobic006G186500--Sobic009G143500 Sobic006G186500--Sobic004G179400 Sobic006G186500--Sobic009G207900 Sobic006G186500--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic006G186500--Sobic010G043800 Sobic007G015500 Sobic007G015500 Sobic006G186500--Sobic007G015500 Sobic001G054000 Sobic001G054000 Sobic006G186500--Sobic001G054000 Sobic006G186500--Sobic003G203300 Sobic005G118400 Sobic005G118400 Sobic006G186500--Sobic005G118400 Sobic007G058001--Sobic010G043800 Sobic002G005600 Sobic002G005600 Sobic007G058001--Sobic002G005600 Sobic007G058001--Sobic001G504400 Sobic003G345500 Sobic003G345500 Sobic007G058001--Sobic003G345500 Sobic007G058001--Sobic006G232600 Sobic007G135800 Sobic007G135800 Sobic007G058001--Sobic007G135800 Sobic001G217900 Sobic001G217900 Sobic007G058001--Sobic001G217900 Sobic003G003450 Sobic003G003450 Sobic007G058001--Sobic003G003450 Sobic007G058001--Sobic009G207900 Sobic002G133900 Sobic002G133900 Sobic002G028400--Sobic002G133900 Sobic003G094350 Sobic003G094350 Sobic002G028400--Sobic003G094350 Sobic002G028400--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic002G028400--Sobic003G070900 Sobic002G028400--Sobic009G170200 Sobic002G028400--Sobic008G074000 Sobic002G028400--Sobic001G540600 Sobic003G287900 Sobic003G287900 Sobic002G028400--Sobic003G287900 Sobic007G103400 Sobic007G103400 Sobic002G028400--Sobic007G103400 Sobic002G331800 Sobic002G331800 Sobic003G125900--Sobic002G331800 Sobic003G125900--Sobic004G179400 Sobic003G125900--Sobic003G070900 Sobic003G125900--Sobic003G094350 Sobic003G125900--Sobic001G060500 Sobic001G118400 Sobic001G118400 Sobic003G125900--Sobic001G118400 Sobic004G252500 Sobic004G252500 Sobic003G125900--Sobic004G252500 Sobic003G125900--Sobic002G028400 Sobic003G125900--Sobic001G500600 Sobic006G233700--Sobic006G232600 Sobic006G233700--Sobic001G500600 Sobic006G233700--Sobic010G110400 Sobic006G233700--Sobic009G170200 Sobic006G233700--Sobic001G060500 Sobic006G233700--Sobic003G203300 Sobic010G171600 Sobic010G171600 Sobic006G233700--Sobic010G171600 Sobic006G233700--Sobic003G070900 Sobic001G219700 Sobic001G219700 Sobic006G233700--Sobic001G219700
Octagon: transcription factors


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