Gene annotation
Transcriptome id Sobic.002G179800.1
Synonym Sb02g022840
Functional annotation mTERF family protein, expressed
UniProt C5XAM9
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF17
NCBI CDD KOG1267; Mitochondrial transcription termination factor, mTERF
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT1G21150 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os11g14130.1 : mTERF family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G206300 ribosomal protein S17, putative, expressed K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
2 Sobic.003G321600 PPR repeat domain containing protein, putative, expressed -
3 Sobic.004G339400 expressed protein -
4 Sobic.004G175700 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.001G413100 nucleotide binding protein, putative, expressed -
6 Sobic.001G290766 - -
7 Sobic.007G191600 exosome complex exonuclease, putative, expressed K12586: RRP43, EXOSC8, exosome complex component RRP43
8 Sobic.009G132800 methyl-binding domain protein MBD, putative, expressed -
9 Sobic.002G144275 - -
10 Sobic.002G394600 peptidase, T1 family, putative, expressed K02727: 20S proteasome subunit alpha 7
11 Sobic.002G136400 expressed protein -
12 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
13 Sobic.001G473800 trpH, putative, expressed K07053: 3',5'-nucleoside bisphosphate phosphatase
14 Sobic.007G030600 NOL1/NOP2/sun family protein, putative, expressed -
15 Sobic.002G402500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
16 Sobic.001G029000 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
17 Sobic.002G185900 zinc finger protein-related, putative, expressed -
18 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
19 Sobic.003G205400 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25
20 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G179800 Sobic002G179800 Sobic007G206300 Sobic007G206300 Sobic002G179800--Sobic007G206300 Sobic003G321600 Sobic003G321600 Sobic002G179800--Sobic003G321600 Sobic004G339400 Sobic004G339400 Sobic002G179800--Sobic004G339400 Sobic004G175700 Sobic004G175700 Sobic002G179800--Sobic004G175700 Sobic001G413100 Sobic001G413100 Sobic002G179800--Sobic001G413100 Sobic001G290766 Sobic001G290766 Sobic002G179800--Sobic001G290766 Sobic007G191600 Sobic007G191600 Sobic002G179800--Sobic007G191600 Sobic009G132800 Sobic009G132800 Sobic002G179800--Sobic009G132800 Sobic002G144275 Sobic002G144275 Sobic002G179800--Sobic002G144275 Sobic001G008100 Sobic001G008100 Sobic007G206300--Sobic001G008100 Sobic001G387800 Sobic001G387800 Sobic007G206300--Sobic001G387800 Sobic007G119600 Sobic007G119600 Sobic007G206300--Sobic007G119600 Sobic001G112400 Sobic001G112400 Sobic007G206300--Sobic001G112400 Sobic004G039400 Sobic004G039400 Sobic007G206300--Sobic004G039400 Sobic001G304000 Sobic001G304000 Sobic007G206300--Sobic001G304000 Sobic001G178500 Sobic001G178500 Sobic007G206300--Sobic001G178500 Sobic006G041800 Sobic006G041800 Sobic007G206300--Sobic006G041800 Sobic009G224400 Sobic009G224400 Sobic007G206300--Sobic009G224400 Sobic006G266700 Sobic006G266700 Sobic003G321600--Sobic006G266700 Sobic003G360300 Sobic003G360300 Sobic003G321600--Sobic003G360300 Sobic007G209600 Sobic007G209600 Sobic003G321600--Sobic007G209600 Sobic001G210000 Sobic001G210000 Sobic003G321600--Sobic001G210000 Sobic001G203500 Sobic001G203500 Sobic003G321600--Sobic001G203500 Sobic005G120700 Sobic005G120700 Sobic003G321600--Sobic005G120700 Sobic001G039300 Sobic001G039300 Sobic003G321600--Sobic001G039300 Sobic004G129500 Sobic004G129500 Sobic003G321600--Sobic004G129500 Sobic001G191900 Sobic001G191900 Sobic003G321600--Sobic001G191900 Sobic007G105900 Sobic007G105900 Sobic004G339400--Sobic007G105900 Sobic003G211700 Sobic003G211700 Sobic004G339400--Sobic003G211700 Sobic004G316800 Sobic004G316800 Sobic004G339400--Sobic004G316800 Sobic009G227100 Sobic009G227100 Sobic004G339400--Sobic009G227100 Sobic004G339400--Sobic001G008100 Sobic009G199500 Sobic009G199500 Sobic004G339400--Sobic009G199500 Sobic004G004100 Sobic004G004100 Sobic004G339400--Sobic004G004100 Sobic002G131400 Sobic002G131400 Sobic004G339400--Sobic002G131400 Sobic006G220400 Sobic006G220400 Sobic004G339400--Sobic006G220400 Sobic001G404100 Sobic001G404100 Sobic004G175700--Sobic001G404100 Sobic003G367900 Sobic003G367900 Sobic004G175700--Sobic003G367900 Sobic008G137600 Sobic008G137600 Sobic004G175700--Sobic008G137600 Sobic002G279000 Sobic002G279000 Sobic004G175700--Sobic002G279000 Sobic007G152400 Sobic007G152400 Sobic004G175700--Sobic007G152400 Sobic001G532100 Sobic001G532100 Sobic004G175700--Sobic001G532100 Sobic006G079900 Sobic006G079900 Sobic004G175700--Sobic006G079900 Sobic001G402300 Sobic001G402300 Sobic004G175700--Sobic001G402300 Sobic001G285300 Sobic001G285300 Sobic004G175700--Sobic001G285300 Sobic010G134100 Sobic010G134100 Sobic001G413100--Sobic010G134100 Sobic001G167500 Sobic001G167500 Sobic001G413100--Sobic001G167500 Sobic009G041800 Sobic009G041800 Sobic001G413100--Sobic009G041800 Sobic008G084100 Sobic008G084100 Sobic001G413100--Sobic008G084100 Sobic004G069400 Sobic004G069400 Sobic001G413100--Sobic004G069400 Sobic001G176900 Sobic001G176900 Sobic001G413100--Sobic001G176900 Sobic002G304400 Sobic002G304400 Sobic001G413100--Sobic002G304400 Sobic003G388900 Sobic003G388900 Sobic001G413100--Sobic003G388900 Sobic003G388700 Sobic003G388700 Sobic001G413100--Sobic003G388700 Sobic010G197900 Sobic010G197900 Sobic001G290766--Sobic010G197900 Sobic001G290766--Sobic001G387800 Sobic005G027300 Sobic005G027300 Sobic001G290766--Sobic005G027300 Sobic005G079500 Sobic005G079500 Sobic001G290766--Sobic005G079500 Sobic001G290766--Sobic002G144275 Sobic008G110500 Sobic008G110500 Sobic001G290766--Sobic008G110500 Sobic004G103600 Sobic004G103600 Sobic001G290766--Sobic004G103600 Sobic001G013200 Sobic001G013200 Sobic001G290766--Sobic001G013200 Sobic003G131300 Sobic003G131300 Sobic001G290766--Sobic003G131300 Sobic010G277000 Sobic010G277000 Sobic007G191600--Sobic010G277000 Sobic003G261100 Sobic003G261100 Sobic007G191600--Sobic003G261100 Sobic007G191600--Sobic005G027300 Sobic003G237400 Sobic003G237400 Sobic007G191600--Sobic003G237400 Sobic003G113400 Sobic003G113400 Sobic007G191600--Sobic003G113400 Sobic007G191600--Sobic008G084100 Sobic001G060300 Sobic001G060300 Sobic007G191600--Sobic001G060300 Sobic001G342200 Sobic001G342200 Sobic007G191600--Sobic001G342200 Sobic001G392800 Sobic001G392800 Sobic007G191600--Sobic001G392800 Sobic004G054700 Sobic004G054700 Sobic009G132800--Sobic004G054700 Sobic009G216700 Sobic009G216700 Sobic009G132800--Sobic009G216700 Sobic009G132800--Sobic001G008100 Sobic007G012900 Sobic007G012900 Sobic009G132800--Sobic007G012900 Sobic006G219000 Sobic006G219000 Sobic009G132800--Sobic006G219000 Sobic004G141700 Sobic004G141700 Sobic009G132800--Sobic004G141700 Sobic004G256300 Sobic004G256300 Sobic009G132800--Sobic004G256300 Sobic001G538500 Sobic001G538500 Sobic009G132800--Sobic001G538500 Sobic002G401700 Sobic002G401700 Sobic009G132800--Sobic002G401700 Sobic002G144275--Sobic001G402300 Sobic010G179700 Sobic010G179700 Sobic002G144275--Sobic010G179700 Sobic006G043700 Sobic006G043700 Sobic002G144275--Sobic006G043700 Sobic002G144275--Sobic008G137600 Sobic002G144275--Sobic002G131400 Sobic002G116500 Sobic002G116500 Sobic002G144275--Sobic002G116500 Sobic003G273400 Sobic003G273400 Sobic002G144275--Sobic003G273400 Sobic007G220900 Sobic007G220900 Sobic002G144275--Sobic007G220900 Sobic002G144275--Sobic008G110500
Octagon: transcription factors


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