Gene annotation
Transcriptome id Sobic.003G407900.1
Synonym Sb03g044270
Functional annotation OsFBX32 - F-box domain containing protein, expressed
UniProt C5XGD1
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF111
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G27340 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os01g69940.1 : OsFBX32 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039274 , Zm00025a026230
Brachypodium KQK11283
Barley -
Wheat TraesCS3A02G435400 , TraesCS3A02G435400 , TraesCS3D02G428200 , TraesCS3D02G428200 , TraesCS3B02G470300 , TraesCS3B02G470300
Populus -


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cDNA sequences
Sobic.003G407900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G192000 3-5 exonuclease/ nucleic acid binding protein, putative, expressed K18740: EXD1, exonuclease 3'-5' domain-containing protein 1
2 Sobic.002G385300 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G458200 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
4 Sobic.002G276900 transcription initiation factor IIB, putative, expressed K03124: TFIIB, GTF2B, SUA7, transcription initiation factor TFIIB
5 Sobic.001G498400 - K18655: DDX19, ATP-dependent RNA helicase DDX19/DBP5
6 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
7 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
8 Sobic.006G096300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
9 Sobic.010G051500 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
10 Sobic.002G390400 expressed protein -
11 Sobic.007G028100 WD repeat-containing protein, putative, expressed -
12 Sobic.002G093900 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
13 Sobic.010G095700 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
14 Sobic.007G150700 Leucine Rich Repeat family protein, expressed K15082: DNA repair protein RAD7
15 Sobic.010G168200 HAD superfamily phosphatase, putative, expressed -
16 Sobic.004G349800 expressed protein -
17 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
18 Sobic.001G033400 protein kinase domain containing protein, expressed -
19 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
20 Sobic.004G102900 FUWA(Ortholog in rice:Chen 2015)(PubMedID : 31659879)@"encodes an NHL domain-containing protein regulating panicle architecture, grain shape and grain weight"(PubMedID : 26043067)@NHL repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G407900 Sobic003G407900 Sobic003G192000 Sobic003G192000 Sobic003G407900--Sobic003G192000 Sobic002G385300 Sobic002G385300 Sobic003G407900--Sobic002G385300 Sobic001G458200 Sobic001G458200 Sobic003G407900--Sobic001G458200 Sobic002G276900 Sobic002G276900 Sobic003G407900--Sobic002G276900 Sobic001G498400 Sobic001G498400 Sobic003G407900--Sobic001G498400 Sobic006G261100 Sobic006G261100 Sobic003G407900--Sobic006G261100 Sobic002G403200 Sobic002G403200 Sobic003G407900--Sobic002G403200 Sobic006G096300 Sobic006G096300 Sobic003G407900--Sobic006G096300 Sobic010G051500 Sobic010G051500 Sobic003G407900--Sobic010G051500 Sobic003G192000--Sobic001G458200 Sobic003G192000--Sobic003G407900 Sobic003G192000--Sobic002G403200 Sobic003G192000--Sobic006G261100 Sobic010G253100 Sobic010G253100 Sobic003G192000--Sobic010G253100 Sobic002G359900 Sobic002G359900 Sobic003G192000--Sobic002G359900 Sobic009G030400 Sobic009G030400 Sobic003G192000--Sobic009G030400 Sobic003G192000--Sobic002G276900 Sobic010G095700 Sobic010G095700 Sobic003G192000--Sobic010G095700 Sobic002G390400 Sobic002G390400 Sobic002G385300--Sobic002G390400 Sobic002G252900 Sobic002G252900 Sobic002G385300--Sobic002G252900 Sobic008G111700 Sobic008G111700 Sobic002G385300--Sobic008G111700 Sobic008G116600 Sobic008G116600 Sobic002G385300--Sobic008G116600 Sobic002G385300--Sobic001G498400 Sobic002G385300--Sobic009G030400 Sobic002G385300--Sobic006G261100 Sobic001G135500 Sobic001G135500 Sobic002G385300--Sobic001G135500 Sobic002G062500 Sobic002G062500 Sobic002G385300--Sobic002G062500 Sobic001G458200--Sobic003G192000 Sobic003G128300 Sobic003G128300 Sobic001G458200--Sobic003G128300 Sobic001G532100 Sobic001G532100 Sobic001G458200--Sobic001G532100 Sobic001G458200--Sobic002G359900 Sobic002G093900 Sobic002G093900 Sobic001G458200--Sobic002G093900 Sobic008G134900 Sobic008G134900 Sobic001G458200--Sobic008G134900 Sobic003G148900 Sobic003G148900 Sobic001G458200--Sobic003G148900 Sobic002G306600 Sobic002G306600 Sobic001G458200--Sobic002G306600 Sobic002G044000 Sobic002G044000 Sobic001G458200--Sobic002G044000 Sobic002G276900--Sobic006G261100 Sobic006G099800 Sobic006G099800 Sobic002G276900--Sobic006G099800 Sobic009G100300 Sobic009G100300 Sobic002G276900--Sobic009G100300 Sobic003G416600 Sobic003G416600 Sobic002G276900--Sobic003G416600 Sobic002G121000 Sobic002G121000 Sobic002G276900--Sobic002G121000 Sobic009G034400 Sobic009G034400 Sobic002G276900--Sobic009G034400 Sobic001G512900 Sobic001G512900 Sobic002G276900--Sobic001G512900 Sobic002G276900--Sobic010G253100 Sobic002G179500 Sobic002G179500 Sobic002G276900--Sobic002G179500 Sobic008G058700 Sobic008G058700 Sobic001G498400--Sobic008G058700 Sobic003G382900 Sobic003G382900 Sobic001G498400--Sobic003G382900 Sobic001G498400--Sobic002G385300 Sobic001G498400--Sobic006G261100 Sobic001G498400--Sobic008G111700 Sobic003G031200 Sobic003G031200 Sobic001G498400--Sobic003G031200 Sobic001G498400--Sobic003G407900 Sobic003G189700 Sobic003G189700 Sobic001G498400--Sobic003G189700 Sobic001G498400--Sobic002G276900 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic006G261100--Sobic010G095700 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic002G403200--Sobic003G192000 Sobic010G207400 Sobic010G207400 Sobic002G403200--Sobic010G207400 Sobic002G403200--Sobic002G359900 Sobic004G272900 Sobic004G272900 Sobic002G403200--Sobic004G272900 Sobic001G033400 Sobic001G033400 Sobic002G403200--Sobic001G033400 Sobic008G160500 Sobic008G160500 Sobic002G403200--Sobic008G160500 Sobic004G196800 Sobic004G196800 Sobic002G403200--Sobic004G196800 Sobic002G403200--Sobic009G030400 Sobic005G032400 Sobic005G032400 Sobic002G403200--Sobic005G032400 Sobic007G034600 Sobic007G034600 Sobic006G096300--Sobic007G034600 Sobic004G067900 Sobic004G067900 Sobic006G096300--Sobic004G067900 Sobic001G106400 Sobic001G106400 Sobic006G096300--Sobic001G106400 Sobic006G096300--Sobic002G359900 Sobic004G102900 Sobic004G102900 Sobic006G096300--Sobic004G102900 Sobic001G488200 Sobic001G488200 Sobic006G096300--Sobic001G488200 Sobic004G028800 Sobic004G028800 Sobic006G096300--Sobic004G028800 Sobic006G096300--Sobic003G031200 Sobic004G250900 Sobic004G250900 Sobic006G096300--Sobic004G250900 Sobic004G018800 Sobic004G018800 Sobic010G051500--Sobic004G018800 Sobic010G051500--Sobic001G532100 Sobic001G285300 Sobic001G285300 Sobic010G051500--Sobic001G285300 Sobic007G203700 Sobic007G203700 Sobic010G051500--Sobic007G203700 Sobic003G316850 Sobic003G316850 Sobic010G051500--Sobic003G316850 Sobic006G143500 Sobic006G143500 Sobic010G051500--Sobic006G143500 Sobic003G424800 Sobic003G424800 Sobic010G051500--Sobic003G424800 Sobic004G019600 Sobic004G019600 Sobic010G051500--Sobic004G019600 Sobic010G193800 Sobic010G193800 Sobic010G051500--Sobic010G193800
Octagon: transcription factors


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