Gene annotation
Transcriptome id Sobic.006G047900.2,Sobic.006G047900.5,Sobic.006G047900.4,Sobic.006G047900.1,Sobic.006G047900.3,Sobic.006G047900.6
Synonym ADL2, DRP3A
Functional annotation dynamin family protein, putative, expressed
UniProt A0A1Z5RC79 , A0A1Z5RC75 , A0A1Z5RC88 , A0A1Z5RCZ8 , A0A1Z5RD42 , A0A1Z5RC77
Pfam PF00350 PF02212 PF01031 PF02212 PF00350 PF01031
Panther DB PTHR11566 PTHR11566:SF62
NCBI CDD KOG0446; Vacuolar sorting protein VPS1, dynamin, and related proteins
KEGG Orthology K17065; dynamin 1-like protein
Gene Ontology GO:0005525; GTP binding GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT4G33650 : dynamin-related protein 3A
RAP-DB (Rice) LOC_Os04g31190.1 : dynamin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011812 , Zm00025a026267
Brachypodium KQK11242 , PNT73477 , KQJ82232 , KQJ82233
Barley HORVU3Hr1G094260.8 , HORVU3Hr1G094260.9 , HORVU3Hr1G094260.1 , HORVU3Hr1G094260.2 , HORVU3Hr1G094260.3 , HORVU3Hr1G094260.4 , HORVU3Hr1G094260.5 , HORVU3Hr1G094260.6 , HORVU3Hr1G094260.7 , HORVU3Hr1G094260.12 , HORVU3Hr1G094260.10 , HORVU3Hr1G094260.11 , HORVU2Hr1G068810.5 , HORVU2Hr1G068810.4 , HORVU2Hr1G068810.7 , HORVU2Hr1G068810.6 , HORVU2Hr1G068810.1 , HORVU2Hr1G068810.3 , HORVU2Hr1G068810.2 , HORVU2Hr1G068810.9 , HORVU2Hr1G068810.8
Wheat TraesCS2A02G281000 , TraesCS2A02G281000 , TraesCS3A02G428000 , TraesCS3A02G428000 , TraesCS2D02G279900 , TraesCS2D02G279900 , TraesCS2D02G279900 , TraesCS2D02G279900 , TraesCS3D02G423500 , TraesCS3D02G423500 , TraesCS3A02G428000 , TraesCS2B02G298400 , TraesCS2B02G298400 , TraesCS3B02G465100 , TraesCS3B02G465100 , TraesCS2A02G281000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G375200 mitotic checkpoint family protein, putative, expressed -
2 Sobic.001G335300 NOC3 - Putative nucleolar complex subunit 3, expressed K14834: nucleolar complex protein 3
3 Sobic.001G450000 nucleoporin, putative, expressed K14300: nuclear pore complex protein Nup133
4 Sobic.004G034700 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
5 Sobic.010G080700 DNA-directed RNA polymerase subunit, putative, expressed K03021: RPC2, DNA-directed RNA polymerase III subunit RPC2
6 Sobic.010G003400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
7 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
8 Sobic.004G005100 peptidase family C78 domain containing protein, expressed -
9 Sobic.002G179400 DNA binding protein, putative, expressed -
10 Sobic.001G004400 - K14290: XPO1, exportin-1
11 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
12 Sobic.006G049600 methyltransferase domain containing protein, expressed -
13 Sobic.009G217200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K02999: RPA1, DNA-directed RNA polymerase I subunit RPA1
14 Sobic.004G019200 DNA-directed RNA polymerase I subunit RPA2, putative, expressed K03002: RPA2, DNA-directed RNA polymerase I subunit RPA2
15 Sobic.008G091300 PolI-like DNA polymerase, putative, expressed K02349: DNA polymerase theta
16 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
17 Sobic.002G399800 PWWP domain containing protein, expressed -
18 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
19 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
20 Sobic.010G169600 OsCML2 - Calmodulin-related calcium sensor protein, expressed -


Gene co-expression network
sample Sobic006G047900 Sobic006G047900 Sobic003G375200 Sobic003G375200 Sobic006G047900--Sobic003G375200 Sobic001G335300 Sobic001G335300 Sobic006G047900--Sobic001G335300 Sobic001G450000 Sobic001G450000 Sobic006G047900--Sobic001G450000 Sobic004G034700 Sobic004G034700 Sobic006G047900--Sobic004G034700 Sobic010G080700 Sobic010G080700 Sobic006G047900--Sobic010G080700 Sobic010G003400 Sobic010G003400 Sobic006G047900--Sobic010G003400 Sobic001G451300 Sobic001G451300 Sobic006G047900--Sobic001G451300 Sobic004G005100 Sobic004G005100 Sobic006G047900--Sobic004G005100 Sobic002G179400 Sobic002G179400 Sobic006G047900--Sobic002G179400 Sobic003G375200--Sobic010G080700 Sobic010G059500 Sobic010G059500 Sobic003G375200--Sobic010G059500 Sobic001G145400 Sobic001G145400 Sobic003G375200--Sobic001G145400 Sobic001G255800 Sobic001G255800 Sobic003G375200--Sobic001G255800 Sobic002G133300 Sobic002G133300 Sobic003G375200--Sobic002G133300 Sobic003G375200--Sobic002G179400 Sobic003G039000 Sobic003G039000 Sobic003G375200--Sobic003G039000 Sobic003G375200--Sobic001G450000 Sobic008G091300 Sobic008G091300 Sobic003G375200--Sobic008G091300 Sobic009G217200 Sobic009G217200 Sobic001G335300--Sobic009G217200 Sobic006G221600 Sobic006G221600 Sobic001G335300--Sobic006G221600 Sobic009G246500 Sobic009G246500 Sobic001G335300--Sobic009G246500 Sobic001G335300--Sobic006G047900 Sobic001G335300--Sobic010G003400 Sobic009G101200 Sobic009G101200 Sobic001G335300--Sobic009G101200 Sobic008G049100 Sobic008G049100 Sobic001G335300--Sobic008G049100 Sobic010G017900 Sobic010G017900 Sobic001G335300--Sobic010G017900 Sobic001G024000 Sobic001G024000 Sobic001G335300--Sobic001G024000 Sobic001G450000--Sobic003G375200 Sobic002G318800 Sobic002G318800 Sobic001G450000--Sobic002G318800 Sobic007G097400 Sobic007G097400 Sobic001G450000--Sobic007G097400 Sobic001G020000 Sobic001G020000 Sobic001G450000--Sobic001G020000 Sobic002G412700 Sobic002G412700 Sobic001G450000--Sobic002G412700 Sobic006G029100 Sobic006G029100 Sobic001G450000--Sobic006G029100 Sobic001G450000--Sobic010G080700 Sobic001G450000--Sobic001G451300 Sobic001G450000--Sobic006G047900 Sobic004G034700--Sobic001G451300 Sobic004G034700--Sobic002G412700 Sobic001G536000 Sobic001G536000 Sobic004G034700--Sobic001G536000 Sobic010G053600 Sobic010G053600 Sobic004G034700--Sobic010G053600 Sobic004G256500 Sobic004G256500 Sobic004G034700--Sobic004G256500 Sobic006G036100 Sobic006G036100 Sobic004G034700--Sobic006G036100 Sobic004G034700--Sobic001G020000 Sobic010G138900 Sobic010G138900 Sobic004G034700--Sobic010G138900 Sobic001G248100 Sobic001G248100 Sobic004G034700--Sobic001G248100 Sobic010G080700--Sobic003G375200 Sobic003G221400 Sobic003G221400 Sobic010G080700--Sobic003G221400 Sobic005G162500 Sobic005G162500 Sobic010G080700--Sobic005G162500 Sobic010G080700--Sobic002G179400 Sobic010G080700--Sobic010G059500 Sobic001G089600 Sobic001G089600 Sobic010G080700--Sobic001G089600 Sobic008G124800 Sobic008G124800 Sobic010G080700--Sobic008G124800 Sobic004G322400 Sobic004G322400 Sobic010G080700--Sobic004G322400 Sobic004G131300 Sobic004G131300 Sobic010G080700--Sobic004G131300 Sobic006G086600 Sobic006G086600 Sobic010G003400--Sobic006G086600 Sobic001G453400 Sobic001G453400 Sobic010G003400--Sobic001G453400 Sobic001G052400 Sobic001G052400 Sobic010G003400--Sobic001G052400 Sobic010G003400--Sobic009G101200 Sobic003G260400 Sobic003G260400 Sobic010G003400--Sobic003G260400 Sobic001G004400 Sobic001G004400 Sobic010G003400--Sobic001G004400 Sobic004G320500 Sobic004G320500 Sobic010G003400--Sobic004G320500 Sobic010G003400--Sobic001G089600 Sobic004G030800 Sobic004G030800 Sobic010G003400--Sobic004G030800 Sobic010G262100 Sobic010G262100 Sobic001G451300--Sobic010G262100 Sobic001G451300--Sobic004G034700 Sobic001G451300--Sobic010G138900 Sobic002G043100 Sobic002G043100 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic010G174700 Sobic010G174700 Sobic001G451300--Sobic010G174700 Sobic002G371600 Sobic002G371600 Sobic001G451300--Sobic002G371600 Sobic009G142000 Sobic009G142000 Sobic001G451300--Sobic009G142000 Sobic002G399800 Sobic002G399800 Sobic001G451300--Sobic002G399800 Sobic003G312100 Sobic003G312100 Sobic004G005100--Sobic003G312100 Sobic004G005100--Sobic010G080700 Sobic001G291000 Sobic001G291000 Sobic004G005100--Sobic001G291000 Sobic006G040500 Sobic006G040500 Sobic004G005100--Sobic006G040500 Sobic008G088872 Sobic008G088872 Sobic004G005100--Sobic008G088872 Sobic010G148932 Sobic010G148932 Sobic004G005100--Sobic010G148932 Sobic004G135400 Sobic004G135400 Sobic004G005100--Sobic004G135400 Sobic010G034000 Sobic010G034000 Sobic004G005100--Sobic010G034000 Sobic004G248600 Sobic004G248600 Sobic004G005100--Sobic004G248600 Sobic001G493700 Sobic001G493700 Sobic002G179400--Sobic001G493700 Sobic002G042600 Sobic002G042600 Sobic002G179400--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic002G179400--Sobic004G053500 Sobic002G429300 Sobic002G429300 Sobic002G179400--Sobic002G429300 Sobic006G184900 Sobic006G184900 Sobic002G179400--Sobic006G184900 Sobic003G233400 Sobic003G233400 Sobic002G179400--Sobic003G233400 Sobic002G179400--Sobic002G133300 Sobic001G065100 Sobic001G065100 Sobic002G179400--Sobic001G065100 Sobic002G179400--Sobic004G322400
Octagon: transcription factors


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